RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 OR3A3P47888 321 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 ACTBP60709 375 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 HTD2P86397 168 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 DCTN2Q13561 401 aaKnown RBP16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 GLT8D1Q68CQ7 371 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 MS4A15Q8N5U1 240 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 OR2AK2Q8NG84 335 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 C4orf3Q8WVX3 66 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 B9D2Q9BPU9 175 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 FAAP24Q9BTP7 215 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 TMEM59Q9BXS4 323 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 VCXQ9H320 206 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 CHMP1AQ9HD42 196 aaPredicted RBP16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 PARP11Q9NR21 331 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 ABRACLQ9P1F3 81 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 WSB1Q9Y6I7 421 aa16.53■□□□□ 0.24
CHRNB1-206ENST00000574054 PTGES3LE9PB15 166 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 YPEL1O60688 119 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 CDK1P06493 297 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 OR5H8P0DN80 308 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 VSIG8P0DPA2 414 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 CNTFRP26992 372 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 RPS27AP62979 156 aaKnown RBP16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 C6orf141Q5SZD1 244 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 TMEM65Q6PI78 240 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 C6orf201Q7Z4U5 140 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 LRRTM1Q86UE6 522 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 ODF3L1Q8IXM7 274 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 IL1F10Q8WWZ1 152 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 YPEL2Q96QA6 119 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 NABP2Q9BQ15 211 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 KCNK15Q9H427 330 aa16.52■□□□□ 0.24
CHRNB1-206ENST00000574054 CASQ2O14958 399 aaPredicted RBP16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 PSMB8P28062 276 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 HMGN3Q15651 99 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 C1orf100Q5SVJ3 147 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 CEACAM19Q7Z692 300 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 SETD6Q8TBK2 473 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 PHYHIPQ92561 330 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 RITA1Q96K30 269 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 ZNF580Q9UK33 172 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 LRRC42Q9Y546 428 aa16.51■□□□□ 0.23
CHRNB1-206ENST00000574054 SAA2-SAA4A0A096LPE2 208 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 SEC14L6B5MCN3 397 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 ATP6V0E1O15342 81 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 NBR2O15453 112 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 SAA2P0DJI9 122 aaPredicted RBP16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 HTR2CP28335 458 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 HSD17B12Q53GQ0 312 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 C9orf66Q5T8R8 295 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 ZNF833PQ6ZTB9 187 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 KCNG3Q8TAE7 436 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 NICN1Q9BSH3 213 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 ANKRD60Q9BZ19 345 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 STEAP1Q9UHE8 339 aa16.5■□□□□ 0.23
CHRNB1-206ENST00000574054 G3V318 75 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 ST8SIA5O15466 376 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 RAMP3O60896 148 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 HLA-DRB1P01911 266 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 SRMP19623 302 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 UNC119Q13432 240 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 SPHARQ15513 63 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 MED22Q15528 200 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 C5orf64Q2M2E5 130 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 PRR25Q96S07 402 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 CHCHD6Q9BRQ6 235 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 KLK15Q9H2R5 256 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 OR51J1Q9H342 316 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 KIAA1456Q9P272 454 aa16.49■□□□□ 0.23
CHRNB1-206ENST00000574054 BLVRBP30043 206 aaPredicted RBP16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 ECI1P42126 302 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 LY6G6FQ5SQ64 297 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 RNLSQ5VYX0 342 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 FAM131AQ6UXB0 335 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 SVOPQ8N4V2 548 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 OR11H1Q8NG94 326 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 OR5B12Q96R08 314 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 IFI27L2Q9H2X8 130 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 PLEKHJ1Q9NW61 149 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 SCN3BQ9NY72 215 aa16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 LSM2Q9Y333 95 aaKnown RBP16.48■□□□□ 0.23
CHRNB1-206ENST00000574054 IGHV7-81A0A0B4J1V7 117 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 TRAV41A0A0B4J266 112 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 SLC22A1O15245 554 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 FHL3Q13643 280 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 P2RY14Q15391 338 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 LIPKQ5VXJ0 399 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 LIN54Q6MZP7 749 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 MOB1BQ7L9L4 216 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 MYOZ3Q8TDC0 251 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 UFD1Q92890 307 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 TMEM203Q969S6 136 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 TM2D1Q9BX74 207 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 GNB4Q9HAV0 340 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 VSIG4Q9Y279 399 aa16.47■□□□□ 0.23
CHRNB1-206ENST00000574054 TMEM14DPA8MWL7 114 aa16.46■□□□□ 0.23
CHRNB1-206ENST00000574054 ANKRD65E5RJM6 399 aa16.46■□□□□ 0.23
CHRNB1-206ENST00000574054 BPNT1O95861 308 aa16.46■□□□□ 0.23
CHRNB1-206ENST00000574054 NAPSAO96009 420 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms