RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 TFF1P04155 84 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 PGA5P0DJD9 388 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 NQO2P16083 231 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 TAGLN2P37802 199 aaKnown RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 MDH2P40926 338 aaKnown RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 UBE2KP61086 200 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 PSG7Q13046 419 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 MRPL49Q13405 166 aaKnown RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 SP5Q6BEB4 398 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 LCN15Q6UWW0 184 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 MOB1BQ7L9L4 216 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 SLC16A13Q7RTY0 426 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF429Q86V71 674 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 SNIP1Q8TAD8 396 aaKnown RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 LIN7CQ9NUP9 197 aaKnown RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 ZFP92A6NM28 416 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 UBE2CO00762 179 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 WNT9BO14905 357 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 SLC25A6P12236 298 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 MPV17P39210 176 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 DLK1P80370 383 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 PLA2G2CQ5R387 149 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF343Q6P1L6 599 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 HAPLN4Q86UW8 402 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 Q8IYB0 196 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 UNKLQ9H9P5 680 aaKnown RBP9.47□□□□□ -0.89
RPAIN-212ENST00000573126 OBP2BQ9NPH6 170 aa9.47□□□□□ -0.89
RPAIN-212ENST00000573126 TTC28Q96AY4 2481 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 SVILO95425 2214 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 SH2D1BO14796 132 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 RAMP3O60896 148 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 HSPB1P04792 205 aaKnown RBP9.46□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF806P0C7X5 589 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 TGFBR3Q03167 851 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF146Q15072 292 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 LILRB2Q8N423 598 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 OR1L1Q8NH94 360 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 SCGB1C1Q8TD33 95 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 LSM10Q969L4 123 aaKnown RBP9.46□□□□□ -0.89
RPAIN-212ENST00000573126 RBMXL1Q96E39 390 aaKnown RBP9.46□□□□□ -0.89
RPAIN-212ENST00000573126 GMPPAQ96IJ6 420 aaPredicted RBP9.46□□□□□ -0.89
RPAIN-212ENST00000573126 ZNF665Q9H7R5 613 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 ZDHHC11Q9H8X9 412 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 TMEM9BQ9NQ34 198 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.89
RPAIN-212ENST00000573126 TREM2Q9NZC2 230 aa9.46□□□□□ -0.89
RPAIN-212ENST00000573126 AGFG2O95081 481 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 HAND1O96004 215 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 PLA2G5P39877 138 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 RPS10P46783 165 aaKnown RBP9.46□□□□□ -0.9
RPAIN-212ENST00000573126 SSX7Q7RTT5 188 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 FGFRL1Q8N441 504 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 ZNF808Q8N4W9 903 aaPredicted RBP9.46□□□□□ -0.9
RPAIN-212ENST00000573126 ZNF525Q8N782 197 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 CNEP1R1Q8N9A8 125 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 NANPQ8TBE9 248 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 KLF14Q8TD94 323 aaPredicted RBP9.46□□□□□ -0.9
RPAIN-212ENST00000573126 MUCL1Q96DR8 90 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 TRIB1Q96RU8 372 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 NIPSNAP3BQ9BS92 247 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 FZR1Q9UM11 496 aa9.46□□□□□ -0.9
RPAIN-212ENST00000573126 M0R296 226 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 KRASP01116 189 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 HBE1P02100 147 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 OR3A1P47881 315 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 RAB2AP61019 212 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 RAB11AP62491 216 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 AESQ08117 197 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 SRSF6Q13247 344 aaKnown RBP9.45□□□□□ -0.9
RPAIN-212ENST00000573126 ZNF726P1Q15940 193 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 HEPN1Q6WQI6 88 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 TMEM178AQ8NBL3 297 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 OR2D2Q9H210 308 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 OR8U8P0C7N1 319 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 RAC2P15153 192 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 ELLP55199 621 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-212ENST00000573126 SOX8P57073 446 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 ZNF787Q6DD87 383 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 OR8G2PQ6IF36 304 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 TPRX1Q8N7U7 411 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 YPEL4Q96NS1 127 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 UFSP2Q9NUQ7 469 aa9.45□□□□□ -0.9
RPAIN-212ENST00000573126 DMXL1Q9Y485 3027 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 UBE2L5PA0A1B0GUS4 154 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 C12orf77C9JDV5 145 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 MLNRO43193 412 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 IGHV2-5P01817 119 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 G6PCP35575 357 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 TNFSF10P50591 281 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 HBG1P69891 147 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 HBG2P69892 147 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 TLE1Q04724 770 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 ZNF816Q0VGE8 651 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-212ENST00000573126 OR52L2PQ8NGH6 319 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
RPAIN-212ENST00000573126 WIPI2Q9Y4P8 454 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms