RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 RSU1Q15404 277 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 C6orf183Q5T699 404 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF691Q5VV52 312 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 CTRB2Q6GPI1 263 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 FAM220AQ7Z4H9 259 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 PXT1Q8NFP0 134 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 OR13C3Q8NGS6 347 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 OR10AC1Q8NH08 325 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 CPNE2Q96FN4 548 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-208ENST00000572270 METTL1Q9UBP6 276 aaKnown RBP9.69□□□□□ -0.86
CCDC40-208ENST00000572270 TRAPPC2LQ9UL33 140 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 ING4Q9UNL4 249 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 SULT1C4O75897 302 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 HBZP02008 142 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 LGALS7P47929 136 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 GK3PQ14409 553 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 FXYD3Q14802 87 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF833PQ6ZTB9 187 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 ODF3L1Q8IXM7 274 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 Q8N1X5 172 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 OR10K1Q8NGX5 313 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 THRSPQ92748 146 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 GHSRQ92847 366 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 TINAGL1Q9GZM7 467 aaPredicted RBP9.68□□□□□ -0.86
CCDC40-208ENST00000572270 FAM192AQ9GZU8 254 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 OR2S2Q9NQN1 319 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 FGFR1OP2Q9NVK5 253 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 ENOPH1Q9UHY7 261 aa9.68□□□□□ -0.86
CCDC40-208ENST00000572270 C2orf70A6NJV1 201 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 H7C2Y5 167 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 M0R2N4 97 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 SHOXO15266 292 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 CCDC22O60826 627 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 RBBP9O75884 186 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 HTR3BO95264 441 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 MT-ND4P03905 459 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 ALKBH1Q13686 389 aaKnown RBP9.67□□□□□ -0.86
CCDC40-208ENST00000572270 MORN2Q502X0 79 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 ATAD3CQ5T2N8 411 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 SYT6Q5T7P8 510 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF57Q68EA5 555 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-208ENST00000572270 TRAT1Q6PIZ9 186 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF497Q6ZNH5 498 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 KCTD20Q7Z5Y7 419 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 OR1L1Q8NH94 360 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 CMTM5Q96DZ9 223 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 GPER1Q99527 375 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 PARP12Q9H0J9 701 aaKnown RBP9.67□□□□□ -0.86
CCDC40-208ENST00000572270 MAGIXQ9H6Y5 334 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 IFT22Q9H7X7 185 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 COA4Q9NYJ1 87 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF581Q9P0T4 197 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 RCC2Q9P258 522 aaKnown RBP9.67□□□□□ -0.86
CCDC40-208ENST00000572270 ST3GAL6Q9Y274 331 aa9.67□□□□□ -0.86
CCDC40-208ENST00000572270 SAA2-SAA4A0A096LPE2 208 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 KIR2DL5BA0A0G2JN68 375 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 KIR2DL5BA0A0G2JPC4 375 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 OR5H14A6NHG9 310 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 BMPR1BO00238 502 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 SCAF4O95104 1147 aaKnown RBP9.66□□□□□ -0.86
CCDC40-208ENST00000572270 FADS2O95864 444 aaKnown RBP9.66□□□□□ -0.86
CCDC40-208ENST00000572270 ISG15P05161 165 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 SAA2P0DJI9 122 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-208ENST00000572270 OR3A3P47888 321 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 MFAP2P55001 183 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 C6orf141Q5SZD1 244 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 LPCAT4Q643R3 524 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 CGB2Q6NT52 195 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 CYP2R1Q6VVX0 501 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 BCDIN3DQ7Z5W3 292 aaKnown RBP9.66□□□□□ -0.86
CCDC40-208ENST00000572270 LINC00596Q86U02 117 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 KIR2DL5AQ8N109 375 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 KIR2DL5BQ8NHK3 375 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 TNFAIP8L1Q8WVP5 186 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 TMEM68Q96MH6 324 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 PRRG3Q9BZD7 231 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 GNG8Q9UK08 70 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 SELENOKQ9Y6D0 94 aa9.66□□□□□ -0.86
CCDC40-208ENST00000572270 A0A1W2PQL4 384 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-208ENST00000572270 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 C11orf94C9JXX5 98 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 SULT1B1O43704 296 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 PRKYO43930 277 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 EDN2P20800 178 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 MC5RP33032 325 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 MAP2K4P45985 399 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 MNAT1P51948 309 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 RBM11P57052 281 aaKnown RBP9.65□□□□□ -0.86
CCDC40-208ENST00000572270 ADARB1P78563 741 aaKnown RBP9.65□□□□□ -0.86
CCDC40-208ENST00000572270 GNMTQ14749 295 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 NXNL2Q5VZ03 156 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 FAM71F2Q6NXP2 309 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF645Q8N7E2 425 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 OR2G2Q8NGZ5 317 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 OR4K15Q8NH41 348 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 RNF5Q99942 180 aa9.65□□□□□ -0.86
CCDC40-208ENST00000572270 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.86
CCDC40-208ENST00000572270 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms