RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ARPC4P59998 168 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 MRPS10P82664 201 aaKnown RBP13.57□□□□□ -0.24
COMMD4-224ENST00000568877 CT45A1Q5HYN5 189 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 FAM131AQ6UXB0 335 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 SLC25A48Q6ZT89 311 aaKnown RBP13.57□□□□□ -0.24
COMMD4-224ENST00000568877 CCDC190Q86UF4 302 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 OR52I2Q8NH67 350 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 CT45A3Q8NHU0 189 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 FCAMRQ8WWV6 532 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 SNAPC3Q92966 411 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 TOLLIPQ9H0E2 274 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 PRDM13Q9H4Q3 707 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 DPM3Q9P2X0 92 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 MXRA5Q9NR99 2828 aa13.57□□□□□ -0.24
COMMD4-224ENST00000568877 LY6LH3BQJ8 138 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 CTDSPLO15194 276 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 CEACAM3P40198 252 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 SSX2Q16385 188 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 RNASE12Q5GAN4 147 aaKnown RBP13.56□□□□□ -0.24
COMMD4-224ENST00000568877 RBMS3Q6XE24 437 aaKnown RBP13.56□□□□□ -0.24
COMMD4-224ENST00000568877 SIGLECL1Q8N7X8 197 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 OR2AK2Q8NG84 335 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 ZNF418Q8TF45 676 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-224ENST00000568877 ZDHHC16Q969W1 377 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 GINS4Q9BRT9 223 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 ABHD14AQ9BUJ0 271 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 PARP12Q9H0J9 701 aaKnown RBP13.56□□□□□ -0.24
COMMD4-224ENST00000568877 RDH8Q9NYR8 311 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 HILPDAQ9Y5L2 63 aa13.56□□□□□ -0.24
COMMD4-224ENST00000568877 ITGB1BP1O14713 200 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 RBBP9O75884 186 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 RCVRNP35243 200 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 DGCR2P98153 550 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 SPANXN2Q5MJ10 180 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 TPTE2P1Q5T6R2 138 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 Q6YL49 198 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 DYNAPQ8N1N2 210 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 OR5AP2Q8NGF4 316 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 EDARADDQ8WWZ3 215 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 C11orf54Q9H0W9 315 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-224ENST00000568877 MEGF9Q9H1U4 602 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 PTTG2Q9NZH5 202 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 KLK11Q9UBX7 282 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 MTFP1Q9UDX5 166 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 V9GYH0 126 aa13.55□□□□□ -0.24
COMMD4-224ENST00000568877 PAX6P26367 422 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 PTBP1P26599 531 aaKnown RBP eCLIP13.54□□□□□ -0.24
COMMD4-224ENST00000568877 IL3RAP26951 378 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 ETV6P41212 452 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 RAB7AP51149 207 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 CDK10Q15131 360 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 LDLRAD3Q86YD5 345 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 LYSMD2Q8IV50 215 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 H1FOOQ8IZA3 346 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-224ENST00000568877 LYG1Q8N1E2 194 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 SMIM4Q8WVI0 70 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 RPEQ96AT9 228 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 NECAP2Q9NVZ3 263 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 NAV3Q8IVL0 2385 aa13.54□□□□□ -0.24
COMMD4-224ENST00000568877 NIPBLQ6KC79 2804 aaeCLIP13.53□□□□□ -0.24
COMMD4-224ENST00000568877 OOSP1A8MZH6 123 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 ST8SIA5O15466 376 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 GSTZ1O43708 216 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-224ENST00000568877 IFNA2P01563 188 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 HLA-DMAP28067 261 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 TAS2R46P59540 309 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 ACTBP60709 375 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 ACTG1P63261 375 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 ST6GALNAC6Q969X2 333 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 AGMATQ9BSE5 352 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 IFI27L2Q9H2X8 130 aa13.53□□□□□ -0.24
COMMD4-224ENST00000568877 A0A0A6YYJ9 748 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 PMP2P02689 132 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 OR5H8P0DN80 308 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 NFYAP23511 347 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-224ENST00000568877 OR3A3P47888 321 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 ZNF137PP52743 207 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 SSBP1Q04837 148 aaKnown RBP13.52□□□□□ -0.25
COMMD4-224ENST00000568877 BAMBIQ13145 260 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 DIAPH2-AS1Q14236 149 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 PYDC2Q56P42 97 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 CCDC144NLQ6NUI1 221 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 LINC00299Q6ZSB3 139 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 ODF3L1Q8IXM7 274 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 OR5H2Q8NGV7 314 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 TOMM40LQ969M1 308 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 GHITMQ9H3K2 345 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 PIPOXQ9P0Z9 390 aa13.52□□□□□ -0.25
COMMD4-224ENST00000568877 RBMX2Q9Y388 322 aaKnown RBP13.52□□□□□ -0.25
COMMD4-224ENST00000568877 CUBNO60494 3623 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 VGLL3A8MV65 326 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 HSD17B6O14756 317 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 HOXA3O43365 443 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-224ENST00000568877 TCF21O43680 179 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 GAPDHP04406 335 aaKnown RBP13.51□□□□□ -0.25
COMMD4-224ENST00000568877 OR8U9P0C7N5 309 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 FCGR2CP31995 323 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 HRH1P35367 487 aa13.51□□□□□ -0.25
COMMD4-224ENST00000568877 IER3P46695 156 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms