RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ANGPTL4Q9BY76 406 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 PGLYRP1O75594 196 aaPredicted RBP9.39□□□□□ -0.91
PALB2-206ENST00000568219 KBTBD11O94819 623 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 CER1O95813 267 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 SFTPCP11686 197 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 ZP4Q12836 540 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 MMDQ15546 238 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 FAM89BQ8N5H3 189 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 RHBDD1Q8TEB9 315 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 IL36RNQ9UBH0 155 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 TMEM211Q6ICI0 200 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 SLC25A47Q6Q0C1 308 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 CXorf67Q86X51 503 aaPredicted RBP9.38□□□□□ -0.91
PALB2-206ENST00000568219 C18orf12Q96KH6 178 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 OR2J1Q9GZK6 312 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 DOCK10Q96BY6 2186 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 A0A1W2PPC4 97 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 CBR3O75828 277 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 CA6P23280 308 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 RBM11P57052 281 aaKnown RBP9.38□□□□□ -0.91
PALB2-206ENST00000568219 IGLV3-21P80748 117 aaPredicted RBP9.38□□□□□ -0.91
PALB2-206ENST00000568219 MRPS21P82921 87 aaKnown RBP9.38□□□□□ -0.91
PALB2-206ENST00000568219 PRDX4Q13162 271 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 IL15RAQ13261 267 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 SPACA9Q96E40 222 aaPredicted RBP9.38□□□□□ -0.91
PALB2-206ENST00000568219 ZDBF2Q9HCK1 2354 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 SLC22A20A6NK97 555 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 HSBP1L1C9JCN9 74 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 SLC17A3O00476 420 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 VAMP5O95183 116 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 CFIP05156 583 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 ANOS1P23352 680 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 CATR1Q13166 79 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 HES3Q5TGS1 186 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 C1orf147Q96MC9 270 aaPredicted RBP9.38□□□□□ -0.91
PALB2-206ENST00000568219 OBP2AQ9NY56 170 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 GNG12Q9UBI6 72 aa9.38□□□□□ -0.91
PALB2-206ENST00000568219 SPTBN2O15020 2390 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 KIAA1671Q9BY89 1806 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 NCOR1O75376 2440 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 IGHV3-43A0A0B4J1X8 118 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 OR7C2O60412 319 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 TMEM50AO95807 157 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 OR5G3P0C626 314 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 IGHV3-43DP0DP04 118 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 PLGLB1Q02325 96 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 RAB31Q13636 194 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 SHHQ15465 462 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 PRSS8Q16651 343 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 PLPPR5Q32ZL2 321 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 ACSM6Q6P461 480 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 OR1L6Q8NGR2 347 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
PALB2-206ENST00000568219 SLC35D1Q9NTN3 355 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 TRBV24-1A0A075B6N3 115 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 EN2P19622 333 aaPredicted RBP9.37□□□□□ -0.91
PALB2-206ENST00000568219 SERF2P84101 59 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 Q56UQ5 140 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 FAM90A2PQ658T7 463 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 CISD2Q8N5K1 135 aaKnown RBP9.37□□□□□ -0.91
PALB2-206ENST00000568219 CADM4Q8NFZ8 388 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
PALB2-206ENST00000568219 FBLN5Q9UBX5 448 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 SRSF10O75494 262 aaKnown RBP9.37□□□□□ -0.91
PALB2-206ENST00000568219 HLA-DRB5Q30154 266 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 PRAMEF5Q5TYX0 476 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 PRAMEF6Q5VXH4 476 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 OR4D5Q8NGN0 318 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 OR4A16Q8NH70 328 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 DIRC2Q96SL1 478 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 C12orf49Q9H741 205 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 OBP2BQ9NPH6 170 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 BET1LQ9NYM9 111 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 OR6C3Q9NZP0 311 aa9.37□□□□□ -0.91
PALB2-206ENST00000568219 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
PALB2-206ENST00000568219 A0A0U1RQV5 110 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 LRP5LA4QPB2 252 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 GJE1A6NN92 205 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 ZIC3O60481 467 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 C1QTNF9P0C862 333 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 SELEP16581 610 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 VEGFBP49765 207 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 CAMPP49913 170 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 RAB35Q15286 201 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 CYP2G1PQ6ZSU1 146 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 FAM131CQ96AQ9 280 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 B3GAT1Q9P2W7 334 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 EFNA2O43921 213 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 MT-CO2P00403 227 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 CELA2AP08217 269 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 SUMO3P55854 103 aaPredicted RBP9.36□□□□□ -0.91
PALB2-206ENST00000568219 CLDN15P56746 228 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 ERVK-16P61578 105 aa9.36□□□□□ -0.91
PALB2-206ENST00000568219 TRA2AQ13595 282 aaKnown RBP eCLIP9.36□□□□□ -0.91
PALB2-206ENST00000568219 ANKRD37Q7Z713 158 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms