RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 C18orf65Q6ZTR6 163 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 NEGR1Q7Z3B1 354 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 C6orf120Q7Z4R8 191 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF440Q8IYI8 595 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC25A45Q8N413 288 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM86BQ8N661 226 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC35G3Q8N808 338 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 Q8N9W7 124 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 OR2Z1Q8NG97 314 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 OR2D3Q8NGH3 330 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 OR9I1Q8NGQ6 314 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 OR2K2Q8NGT1 345 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 OR2T4Q8NH00 348 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 COQ8AQ8NI60 647 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 PYDC1Q8WXC3 89 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC35B4Q969S0 331 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 TMA16Q96EY4 203 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CPNE2Q96FN4 548 aaPredicted RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC35E1Q96K37 410 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 YPEL4Q96NS1 127 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 PPP1R2P1Q96PQ5 205 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF649Q9BS31 505 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CHAC1Q9BUX1 264 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 TRIM4Q9C037 500 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 DCSTAMPQ9H295 470 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 OR52D1Q9H346 318 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 NMNAT1Q9HAN9 279 aaPredicted RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 NOX3Q9HBY0 568 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 MMP26Q9NRE1 261 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 INIPQ9NRY2 104 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM216Q9P0N5 145 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF223Q9UK11 482 aaPredicted RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 VPREB3Q9UKI3 123 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 UTP11Q9Y3A2 253 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 PLEKHH2Q8IVE3 1493 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CLUHO75153 1309 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 MAST4O15021 2626 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SETXQ7Z333 2677 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 CCDC144AA2RUR9 1427 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 IGKV6-21A0A0C4DH24 114 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 IGHV3-66A0A0C4DH42 116 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 A0A1B0GV72 72 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 C5orf49A4QMS7 147 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 GOLGA6L4A6NEF3 574 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 OR6C6A6NF89 314 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 KRTAP16-1A8MUX0 517 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 EEF1E1-BLOC1S5C9J1V9 151 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF878C9JN71 531 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 C11orf94C9JXX5 98 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 UPK1AO00322 258 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 EEF1E1O43324 174 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ANGPTL7O43827 346 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 EIF1BO60739 113 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 IFNA21P01568 189 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 IGLV2-8P01709 118 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 IGHV4-34P06331 123 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 SNRPAP09012 282 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 SEC11BP0C7V7 166 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ESDP10768 282 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ADRB3P13945 408 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 KCNE1P15382 129 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 CTLA4P16410 223 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 OMGP23515 440 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 EIF1P41567 113 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 CRISP3P54108 245 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 DEFA1P59665 94 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 GABARAPL2P60520 117 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 PSG4Q00888 419 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 EMX1Q04741 257 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF239Q16600 458 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 DEFB115Q30KQ5 88 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 C14orf177Q52M58 125 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 TRMT12Q53H54 448 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 CLLU1OSQ5K130 101 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM42Q69YG0 159 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 FAAP20Q6NZ36 180 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 IGFL2Q6UWQ7 119 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 SHISA6Q6ZSJ9 500 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 GLT6D1Q7Z4J2 308 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF329Q86UD4 541 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 DEFB123Q8N688 67 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 NATD1Q8N6N6 113 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ZIC4Q8N9L1 334 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 OR1L1Q8NH94 360 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 OR5K1Q8NHB7 308 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 YIPF5Q969M3 257 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 APOBEC3DQ96AK3 386 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 CEP170P1Q96L14 293 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 C1orf147Q96MC9 270 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF382Q96SR6 550 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 SND1-IT1Q9HBX3 110 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 CA10Q9NS85 328 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 C19orf12Q9NSK7 152 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 TIMM22Q9Y584 194 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 NRAPQ86VF7 1730 aa2.36□□□□□ -2.03
HERPUD1-211ENST00000566550 TET2Q6N021 2002 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 PCNX3Q9H6A9 2034 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 MUC3AQ02505 3323 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms