RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CDPF1Q6NVV7 123 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 ZNF525Q8N782 197 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 NBEAQ8NFP9 2946 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
CDH1-209ENST00000566510 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 ZMAT5Q9UDW3 170 aaKnown RBP12.07□□□□□ -0.48
CDH1-209ENST00000566510 UBE2L5PA0A1B0GUS4 154 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 A0A1W2PR80 420 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
CDH1-209ENST00000566510 BEND4Q6ZU67 534 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 C1orf87Q8N0U7 546 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 TMEM251Q8N6I4 163 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 PFDN5Q99471 154 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 OR51I2Q9H344 312 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 RNF150Q9ULK6 438 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 TRAV1-1A0A0B4J248 108 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 CLDN1O95832 211 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 OR2H2O95918 312 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 MT-CO3P00414 261 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 SLC25A6P12236 298 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 PLA2G5P39877 138 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
CDH1-209ENST00000566510 ZNF880Q6PDB4 577 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 LIN7CQ9NUP9 197 aaKnown RBP12.06□□□□□ -0.48
CDH1-209ENST00000566510 CISD1Q9NZ45 108 aaKnown RBP12.06□□□□□ -0.48
CDH1-209ENST00000566510 PIGBOS1A0A0B4J2F0 54 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 B4DEV8 164 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 CLDN34H7C241 214 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 SS18L1O75177 396 aaPredicted RBP12.06□□□□□ -0.48
CDH1-209ENST00000566510 TRGC1P0CF51 173 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 HAPLN4Q86UW8 402 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 ZNF383Q8NA42 475 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
CDH1-209ENST00000566510 CABLES2Q9BTV7 478 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 OPA3Q9H6K4 179 aa12.06□□□□□ -0.48
CDH1-209ENST00000566510 TRBV6-6A0A0A6YYG2 114 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 MAP1LC3B2A6NCE7 125 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 CDIPTO14735 213 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 NXPH2O95156 264 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 SOD3P08294 240 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 SELEP16581 610 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 RNPS1Q15287 305 aaKnown RBP12.05□□□□□ -0.48
CDH1-209ENST00000566510 ZNF585BQ52M93 769 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 MDP1Q86V88 176 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 MAP1LC3BQ9GZQ8 125 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 RBKSQ9H477 322 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 TMEM9BQ9NQ34 198 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 ABI3Q9P2A4 366 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 TINAGQ9UJW2 476 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 J3QT63 122 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 KRASP01116 189 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
CDH1-209ENST00000566510 LRRC75BQ2VPJ9 315 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 Q6P435 159 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 FGFRL1Q8N441 504 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 FRZBQ92765 325 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 LHX4Q969G2 390 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 SSX3Q99909 188 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
CDH1-209ENST00000566510 LRP5LA4QPB2 252 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 ZNF737O75373 536 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 CYB5R3P00387 301 aaPredicted RBP12.04□□□□□ -0.48
CDH1-209ENST00000566510 GRPP07492 148 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 FABP4P15090 132 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 HOXA6P31267 233 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 ADIRFQ15847 76 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 UBALD2Q8IYN6 164 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 DRAM1Q8N682 238 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 SCCPDHQ8NBX0 429 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 RTL8AQ9BWD3 113 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 STRADBQ9C0K7 418 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 GPR179Q6PRD1 2367 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 CEBPDP49716 269 aaPredicted RBP12.04□□□□□ -0.48
CDH1-209ENST00000566510 SLC38A11Q08AI6 406 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
CDH1-209ENST00000566510 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 ZNF808Q8N4W9 903 aaPredicted RBP12.04□□□□□ -0.48
CDH1-209ENST00000566510 NECAP1Q8NC96 275 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 OR10G4Q8NGN3 311 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 ABHD5Q8WTS1 349 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 CA5BP1Q8WTZ4 195 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 PKIBQ9C010 78 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
CDH1-209ENST00000566510 DEFB127Q9H1M4 99 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 SDF2L1Q9HCN8 221 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 FOXJ2Q9P0K8 574 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 DMRT1Q9Y5R6 373 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.04□□□□□ -0.48
CDH1-209ENST00000566510 IL18BPO95998 194 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 CD55P08174 381 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 TUBG1P23258 451 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 ERVS71-1P61550 626 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 SERF2P84101 59 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
CDH1-209ENST00000566510 ZNF497Q6ZNH5 498 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 MBD3L1Q8WWY6 194 aa12.04□□□□□ -0.48
CDH1-209ENST00000566510 PSMG3Q9BT73 122 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms