RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 IL1F10Q8WWZ1 152 aa11.09□□□□□ -0.63
HERPUD1-210ENST00000565966 TOMM40LQ969M1 308 aa11.09□□□□□ -0.63
HERPUD1-210ENST00000565966 YPEL2Q96QA6 119 aa11.09□□□□□ -0.63
HERPUD1-210ENST00000565966 CITED1Q99966 193 aa11.09□□□□□ -0.63
HERPUD1-210ENST00000565966 TET2Q6N021 2002 aaPredicted RBP11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 A0A1W2PPI3 338 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 CD24P25063 80 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 RAB7AP51149 207 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 SRSF4Q08170 494 aaKnown RBP11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 LY6G6FQ5SQ64 297 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 STEAP3Q658P3 488 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 THNSL2Q86YJ6 484 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 OR8H3Q8N146 312 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 ST6GALNAC6Q969X2 333 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 AKR1E2Q96JD6 320 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 PRSS22Q9GZN4 317 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 ABCG5Q9H222 651 aa11.08□□□□□ -0.64
HERPUD1-210ENST00000565966 TRAV18A0A075B6X5 111 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 IGKV1-6A0A0C4DH72 117 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 TMEM235A6NFC5 223 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 FAM90A9PA6NNJ1 464 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 HSD17B6O14756 317 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 RGS11O94810 467 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 GAPDHP04406 335 aaKnown RBP11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 GSTP1P09211 210 aaKnown RBP11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 FAM106CPP0CH98 169 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 IL3RAP26951 378 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 ZNF816Q0VGE8 651 aaPredicted RBP11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 HACD4Q5VWC8 232 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 CLVS1Q8IUQ0 354 aaPredicted RBP11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 IZUMO1Q8IYV9 350 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 Q8N2B8 174 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 CAPSLQ8WWF8 208 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 MAFIPQ8WZ33 124 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 CFHR4Q92496 578 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 PHF21AQ96BD5 680 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 DCSTAMPQ9H295 470 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 ZNF702PQ9H963 129 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 ZNF230Q9UIE0 474 aaPredicted RBP11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 SIGLEC9Q9Y336 463 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 WNK1Q9H4A3 2382 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
HERPUD1-210ENST00000565966 A0A0A6YYH2 397 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 A6NJ64 397 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 TIMM23O14925 209 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 OR2F2O95006 317 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 DTYMKP23919 212 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 TALDO1P37837 337 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 REG1BP48304 166 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 RORCP51449 518 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 ZNF137PP52743 207 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 BLCAPP62952 87 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 SRSF7Q16629 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 PNLIPRP3Q17RR3 467 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 UBE2NLQ5JXB2 153 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 Q6ZS49 121 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 DRAM1Q8N682 238 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 SAMD12Q8N8I0 201 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 OR4A4PQ8NGN8 299 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 NUDCD2Q8WVJ2 157 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 RBM14Q96PK6 669 aaKnown RBP11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 SLC25A33Q9BSK2 321 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 ABHD14AQ9BUJ0 271 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 PARP12Q9H0J9 701 aaKnown RBP11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 DIABLOQ9NR28 239 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 OR1A1Q9P1Q5 309 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 SLC23A1Q9UHI7 598 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 SCOCQ9UIL1 159 aa11.06□□□□□ -0.64
HERPUD1-210ENST00000565966 IGKV1D-8A0A087WSZ0 117 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 IGHV1-3A0A0C4DH29 117 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 FABP7O15540 132 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 SSX5O60225 188 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 LPLP06858 475 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 ZBTB25P24278 435 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 PITPNAQ00169 270 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 KIR2DS1Q14954 304 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 SPCS2Q15005 226 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 HERPUD1Q15011 391 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 LYG1Q8N1E2 194 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 OR56B4Q8NH76 319 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 RTN4IP1Q8WWV3 396 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 CABLES2Q9BTV7 478 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 COMMD3Q9UBI1 195 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 FBN3Q75N90 2809 aa11.05□□□□□ -0.64
HERPUD1-210ENST00000565966 ITGB1BP1O14713 200 aa11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 ST8SIA5O15466 376 aa11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 HSPA12AO43301 675 aa11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 XRCC3O43542 346 aa11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 LANCL1O43813 399 aa11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 SNRNP70P08621 437 aaKnown RBP11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 CEACAM6P40199 344 aa11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 TMBIM6P55061 237 aa11.04□□□□□ -0.64
HERPUD1-210ENST00000565966 GNG2P59768 71 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms