RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 IZUMO1RA6ND01 250 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 OR8U9P0C7N5 309 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 CCR9P51686 369 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 IL13RA2Q14627 380 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 CT45A1Q5HYN5 189 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 TMPRSS11AQ6ZMR5 421 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 SLC25A48Q6ZT89 311 aaKnown RBP7.89□□□□□ -1.15
SF3B3-204ENST00000563739 GPR141Q7Z602 305 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 ODF3L1Q8IXM7 274 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 OR52N1Q8NH53 320 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 CT45A3Q8NHU0 189 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 CHCHD6Q9BRQ6 235 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 RHOFQ9HBH0 211 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 PARP11Q9NR21 331 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 CLEC2DQ9UHP7 191 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 ADAM30Q9UKF2 790 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 TPRKBQ9Y3C4 175 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 OR4C45A6NMZ5 311 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 C12orf77C9JDV5 145 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 E9PI62 339 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 GABRPO00591 440 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 MYL12BO14950 172 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 MRPS14O60783 128 aaKnown RBP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 NDUFA3O95167 84 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 IGHV3-11P01762 117 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 ISG15P05161 165 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 CDK1P06493 297 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 OR5H8P0DN80 308 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 C21orf33P30042 268 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 GBX2P52951 348 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 EWSR1Q01844 656 aaKnown RBP eCLIP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 ALKBH1Q13686 389 aaKnown RBP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 OR2G6Q5TZ20 316 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 ZNF529Q6P280 563 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 SPARTQ8N0X7 666 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 STX19Q8N4C7 294 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 RPP25LQ8N5L8 163 aaKnown RBP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 SUMF2Q8NBJ7 301 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 OR52M1Q8NGK5 317 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 OR10K1Q8NGX5 313 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 DUSP21Q9H596 190 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 VCX3AQ9NNX9 186 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 PAK1IP1Q9NWT1 392 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 CHCHD3Q9NX63 227 aaKnown RBP7.88□□□□□ -1.15
SF3B3-204ENST00000563739 SCN3BQ9NY72 215 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 GAB2Q9UQC2 676 aa7.88□□□□□ -1.15
SF3B3-204ENST00000563739 TMEM212A6NML5 194 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 PTGES3LE9PB15 166 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 BRI3O95415 125 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 LALBAP00709 142 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 SERPINA3P01011 423 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 ARSBP15848 533 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 PITPNAQ00169 270 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 MMDQ15546 238 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 KISS1Q15726 138 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 C5orf64Q2M2E5 130 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 CCDC58Q4VC31 144 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 TMEM244Q5VVB8 128 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 RNLSQ5VYX0 342 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 XAF1Q6GPH4 301 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 ASCL4Q6XD76 172 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 SGPP2Q8IWX5 399 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 ZNF565Q8N9K5 539 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 ZNF485Q8NCK3 441 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 PXT1Q8NFP0 134 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 OR51A2Q8NGJ7 313 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 RHOVQ96L33 236 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 TSC22D3Q99576 134 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 DPCDQ9BVM2 203 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-204ENST00000563739 MRPL20Q9BYC9 149 aaKnown RBP7.87□□□□□ -1.15
SF3B3-204ENST00000563739 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 IFT22Q9H7X7 185 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 RSL24D1Q9UHA3 163 aaKnown RBP7.87□□□□□ -1.15
SF3B3-204ENST00000563739 STUB1Q9UNE7 303 aa7.87□□□□□ -1.15
SF3B3-204ENST00000563739 HSPG2P98160 4391 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 A0A1W2PN81 502 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 CCDC160A6NGH7 325 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 ZNF701M0R085 212 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-204ENST00000563739 SDCBPO00560 298 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-204ENST00000563739 ZNF20P17024 532 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 CHRNA7P36544 502 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 MECP2P51608 486 aaKnown RBP7.86□□□□□ -1.15
SF3B3-204ENST00000563739 WNT4P56705 351 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 ACTBP60709 375 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 SSBP2P81877 361 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-204ENST00000563739 GNMTQ14749 295 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 NEDD8Q15843 81 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 ECSCRQ19T08 205 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 Q3ZCU0 254 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 RPL22L1Q6P5R6 122 aaKnown RBP7.86□□□□□ -1.15
SF3B3-204ENST00000563739 OR13F1Q8NGS4 319 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 OR5AK2Q8NH90 309 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 RGP1Q92546 391 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-204ENST00000563739 ARL11Q969Q4 196 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 TMEM106AQ96A25 262 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 SMIM19Q96E16 107 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 PDCD1LG2Q9BQ51 273 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 MND1Q9BWT6 205 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 NEK6Q9HC98 313 aa7.86□□□□□ -1.15
SF3B3-204ENST00000563739 BABAM2Q9NXR7 383 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms