RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 C15orf40Q8WUR7 153 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 MALSU1Q96EH3 234 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 CYYR1Q96J86 154 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 SLIRPQ9GZT3 109 aaKnown RBP12.63□□□□□ -0.39
USB1-208ENST00000563207 AUNIPQ9H7T9 357 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 RABL2AQ9UBK7 228 aaPredicted RBP12.63□□□□□ -0.39
USB1-208ENST00000563207 RABL2BQ9UNT1 228 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 AMMECR1Q9Y4X0 333 aaPredicted RBP12.63□□□□□ -0.39
USB1-208ENST00000563207 A3GALT2U3KPV4 340 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 DPPA5A6NC42 116 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 FAM25AB3EWG3 89 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 FAM25CB3EWG5 89 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 FAM25GB3EWG6 89 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 J3QR06 171 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 RGS5O15539 181 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 YPEL1O60688 119 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
USB1-208ENST00000563207 ELK1P19419 428 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 HTR1DP28221 377 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 CEACAM3P40198 252 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 CBX5P45973 191 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 HLA-DRB5Q30154 266 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 LDLRAD2Q5SZI1 272 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 Q6ZPA2 131 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 LHFPL4Q7Z7J7 247 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 C11orf44Q8N8P7 122 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 OR4A4PQ8NGN8 299 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 FAM110DQ8TAY7 271 aaPredicted RBP12.62□□□□□ -0.39
USB1-208ENST00000563207 PIFOQ8TCI5 191 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 YPEL2Q96QA6 119 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 OCSTAMPQ9BR26 566 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 NXF2Q9GZY0 626 aaKnown RBP12.62□□□□□ -0.39
USB1-208ENST00000563207 MEGF9Q9H1U4 602 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 MMP28Q9H239 520 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 ZNF286AQ9HBT8 521 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 OR2S2Q9NQN1 319 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 GNG12Q9UBI6 72 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 PSG11Q9UQ72 335 aa12.62□□□□□ -0.39
USB1-208ENST00000563207 BTBD17A6NE02 478 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 M0QZ24 198 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 TIMM23O14925 209 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 CHST1O43916 411 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 ZBTB25P24278 435 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 RAB13P51153 203 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 TAS2R20P59543 309 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 AANATQ16613 207 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 LTC4SQ16873 150 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 BAIAP2L2Q6UXY1 529 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 OR4P4Q8NGL7 312 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 MMP27Q9H306 513 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 DPM3Q9P2X0 92 aa12.61□□□□□ -0.39
USB1-208ENST00000563207 LEUTXA8MZ59 168 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 OOSP1A8MZH6 123 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 BUB1B-PAK6H3BSN5 160 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 FABP7O15540 132 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 CTXN2P0C2S0 81 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 PRSS3P35030 304 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 MORN2Q502X0 79 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 OR5R1Q8NH85 324 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 NUDCD2Q8WVJ2 157 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 IL1F10Q8WWZ1 152 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 GHITMQ9H3K2 345 aa12.6□□□□□ -0.39
USB1-208ENST00000563207 ELF5Q9UKW6 265 aaPredicted RBP12.6□□□□□ -0.39
USB1-208ENST00000563207 TET2Q6N021 2002 aaPredicted RBP12.6□□□□□ -0.39
USB1-208ENST00000563207 FAM172BPA6NC97 362 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 SULT1C2O00338 296 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 CTDSP2O14595 271 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 ITGB1BP1O14713 200 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 SSX5O60225 188 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 HLA-DQB1P01920 261 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 SCTP09683 121 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 ARHGDIBP52566 201 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 HABP2Q14520 560 aaPredicted RBP12.59□□□□□ -0.39
USB1-208ENST00000563207 LRRC75BQ2VPJ9 315 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 CCDC144NLQ6NUI1 221 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
USB1-208ENST00000563207 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 OR10X1Q8NGY0 326 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 UBALD1Q8TB05 177 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 EDARADDQ8WWZ3 215 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 DCUN1D5Q9BTE7 237 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 CABLES2Q9BTV7 478 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 C6orf62Q9GZU0 229 aaPredicted RBP12.59□□□□□ -0.39
USB1-208ENST00000563207 TOLLIPQ9H0E2 274 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 MIXL1Q9H2W2 232 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 SCPEP1Q9HB40 452 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
USB1-208ENST00000563207 ZNF230Q9UIE0 474 aaPredicted RBP12.59□□□□□ -0.39
USB1-208ENST00000563207 IGHV3-43A0A0B4J1X8 118 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 VGLL3A8MV65 326 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 HSPA12AO43301 675 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 IGHV3-43DP0DP04 118 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 IL3RAP26951 378 aa12.58□□□□□ -0.4
USB1-208ENST00000563207 CNIH2Q6PI25 160 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms