RNA–Protein interactions for RNA: ENST00000562754.1

VPS4A-202, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 2

Gene VPS4A, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-202ENST00000562754 FCGR2CP31995 323 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 MEF2DQ14814 521 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 LY6G6FQ5SQ64 297 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 LDLRAD3Q86YD5 345 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 PDZD9Q8IXQ8 264 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 LHX4Q969G2 390 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 CLEC7AQ9BXN2 247 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 KCNS2Q9ULS6 477 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 HIVEP1P15822 2718 aa13.52□□□□□ -0.25
VPS4A-202ENST00000562754 ODF3BA8MYP8 253 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 RGS11O94810 467 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 ZNF134P52741 427 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 Q3ZCU0 254 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 CT45A1Q5HYN5 189 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 KLF17Q5JT82 389 aaPredicted RBP13.51□□□□□ -0.25
VPS4A-202ENST00000562754 NCR3LG1Q68D85 454 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 DHRS11Q6UWP2 260 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 ABHD12Q8N2K0 398 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 ARRDC1Q8N5I2 433 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 OR11H6Q8NGC7 330 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 OR13D1Q8NGV5 346 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 CT45A3Q8NHU0 189 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 ZNF596Q8TC21 504 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 GIMAP1Q8WWP7 306 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 FXYD6Q9H0Q3 95 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 C11orf54Q9H0W9 315 aaPredicted RBP13.51□□□□□ -0.25
VPS4A-202ENST00000562754 HEXA-AS1Q9H8Q6 139 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 CELSR1Q9NYQ6 3014 aa13.51□□□□□ -0.25
VPS4A-202ENST00000562754 IGHV3OR16-10A0A075B7F0 116 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 TRAV40A0A0B4J280 105 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 IGKV1D-13A0A0B4J2D9 117 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 CENPVL3A0A0U1RRI6 287 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 J3QR06 171 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 ST8SIA5O15466 376 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 LY6G6DO95868 133 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 FSHBP01225 129 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 PPYP01298 95 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 IGLV1-47P01700 117 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 IGHV4-38-2P0DP08 117 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 IGKV1-13P0DP09 117 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 FOSL1P15407 271 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 BTCP35070 178 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 FAUP35544 74 aaKnown RBP13.5□□□□□ -0.25
VPS4A-202ENST00000562754 ZNF626Q68DY1 528 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 SLC25A48Q6ZT89 311 aaKnown RBP13.5□□□□□ -0.25
VPS4A-202ENST00000562754 LHFPL1Q86WI0 220 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 C8orf31Q8N9H6 132 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 OR51S1Q8NGJ8 323 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 OR9G1Q8NH87 305 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 DEDD2Q8WXF8 326 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 ZNF2Q9BSG1 426 aaPredicted RBP13.5□□□□□ -0.25
VPS4A-202ENST00000562754 ABHD14AQ9BUJ0 271 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 IFI27L2Q9H2X8 130 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 MCUBQ9NWR8 336 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 OR2W1Q9Y3N9 320 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 F8P00451 2351 aa13.5□□□□□ -0.25
VPS4A-202ENST00000562754 SONP18583 2426 aaKnown RBP13.49□□□□□ -0.25
VPS4A-202ENST00000562754 A0A1W2PRD5 423 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 A0A1W2PRF3 423 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 A0A1W2PRM7 423 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 OR5H14A6NHG9 310 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 DISC1C4P0D8 188 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 ITGB1BP1O14713 200 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 IFNA6P05013 189 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 TSPAN5P62079 268 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 ASAH1Q13510 395 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 HLA-DRB5Q30154 266 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 LDLRAD2Q5SZI1 272 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 AADACL3Q5VUY0 350 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 C16orf87Q6PH81 154 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 LINC00311Q8N616 119 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 OR2AK2Q8NG84 335 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 OR4P4Q8NGL7 312 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 OR6F1Q8NGZ6 308 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 EDARADDQ8WWZ3 215 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 MRGPRFQ96AM1 343 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 MOB3AQ96BX8 217 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 C7orf50Q9BRJ6 194 aaKnown RBP13.49□□□□□ -0.25
VPS4A-202ENST00000562754 AGMATQ9BSE5 352 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 YAE1D1Q9NRH1 226 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 SLC2A8Q9NY64 477 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 MAST4O15021 2626 aa13.49□□□□□ -0.25
VPS4A-202ENST00000562754 LYRM1O43325 122 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 ARG1P05089 322 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 OR8U9P0C7N5 309 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 UBE2E1P51965 193 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 FXYD4P59646 89 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 HERV-K104P61576 105 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 SCGB2B2Q4G0G5 96 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 RUSC1-AS1Q66K80 236 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 BEND2Q8NDZ0 799 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 OR13C8Q8NGS7 320 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 OR8U1Q8NH10 309 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 C5orf30Q96GV9 206 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 MMP28Q9H239 520 aa13.48□□□□□ -0.25
VPS4A-202ENST00000562754 IGHV1-69DA0A0B4J2H0 117 aa13.47□□□□□ -0.25
VPS4A-202ENST00000562754 NAP1L6A6NFF2 107 aa13.47□□□□□ -0.25
VPS4A-202ENST00000562754 A8MV72 311 aaPredicted RBP13.47□□□□□ -0.25
VPS4A-202ENST00000562754 TOR1AO14656 332 aa13.47□□□□□ -0.25
VPS4A-202ENST00000562754 IGHV1-69P01742 117 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms