RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF251Q9BRH9 671 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 PPIL3Q9H2H8 161 aaKnown RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 SLA2Q9H6Q3 261 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 EXOSC4Q9NPD3 245 aaKnown RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 GSTK1Q9Y2Q3 226 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 AGRNO00468 2067 aa3.9□□□□□ -1.78
HERC1-213ENST00000561359 IGHV4-4A0A075B6R2 117 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 MEIKINA0A087WXM9 373 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 A0A0G2JLM5 398 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 TRBV2A0A0J9YWF9 115 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 TMEM269A0A1B0GVZ9 245 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 SNTNA6NMZ2 147 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 C11orf94C9JXX5 98 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 AIREO43918 545 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 FKBP6O75344 327 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 SULT1C4O75897 302 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 CYB5AP00167 134 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 T-ENOLP0DO92 83 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 BCL3P20749 454 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 CBX5P45973 191 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 GNG2P59768 71 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 ACTBP60709 375 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 CRMP1Q14194 572 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 C5orf64Q2M2E5 130 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 TMEM42Q69YG0 159 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 ZNF660Q6AZW8 331 aaPredicted RBP3.9□□□□□ -1.79
HERC1-213ENST00000561359 PVRIGQ6DKI7 326 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 EPGNQ6UW88 154 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 IZUMO2Q6UXV1 221 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 SLC16A12Q6ZSM3 486 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 PPP1R27Q86WC6 154 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 NR2C2APQ86WQ0 139 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 CLVS1Q8IUQ0 354 aaPredicted RBP3.9□□□□□ -1.79
HERC1-213ENST00000561359 SLC38A6Q8IZM9 456 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 CENPSQ8N2Z9 138 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 ARL6IP6Q8N6S5 226 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 ANKRD42Q8N9B4 389 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 OR13A1Q8NGR1 328 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 RP9Q8TA86 221 aaKnown RBP3.9□□□□□ -1.79
HERC1-213ENST00000561359 RDH12Q96NR8 316 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 ROPN1BQ9BZX4 212 aaPredicted RBP3.9□□□□□ -1.79
HERC1-213ENST00000561359 PBOV1Q9GZY1 135 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 C11orf54Q9H0W9 315 aaPredicted RBP3.9□□□□□ -1.79
HERC1-213ENST00000561359 ROPN1Q9HAT0 212 aaPredicted RBP3.9□□□□□ -1.79
HERC1-213ENST00000561359 SCPEP1Q9HB40 452 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 TAS2R1Q9NYW7 299 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 PEF1Q9UBV8 284 aaKnown RBP3.9□□□□□ -1.79
HERC1-213ENST00000561359 RNF150Q9ULK6 438 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 NUBP2Q9Y5Y2 271 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 SELENOKQ9Y6D0 94 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 ENPP4Q9Y6X5 453 aa3.9□□□□□ -1.79
HERC1-213ENST00000561359 FAT1Q14517 4588 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 TRGV11A0A075B6L2 103 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 IGKV1-27A0A075B6S5 117 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 ACOD1A6NK06 481 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 H3BNX3 289 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 HSPB6O14558 160 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 BET1O15155 118 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 DEFB4AO15263 64 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 NBR2O15453 112 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 RGS16O15492 202 aaPredicted RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 TXNL1O43396 289 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 DENRO43583 198 aaKnown RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 CCDC22O60826 627 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 KRT36O76013 467 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 TNFAIP8O95379 198 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 IFNA10P01566 189 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 TRBV12-3P01733 135 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 CSN2P05814 226 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 CGB3P0DN86 165 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 CGB7P0DN87 165 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 SSTR5P35346 364 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 ALDH3B2P48448 385 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 NUDT2P50583 147 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 ALDH3A2P51648 485 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 CRIP2P52943 208 aaPredicted RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 RPS16P62249 146 aaKnown RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 CX3CL1P78423 397 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 PLGLAQ15195 96 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 ANKRD55Q3KP44 614 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 Q5VSD8 79 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 CD200R1LQ6Q8B3 271 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 Q6ZR54 194 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 TCEANCQ8N8B7 351 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 LFNGQ8NES3 379 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 OR2T12Q8NG77 320 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 OTOSQ8NHW6 89 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 MRGPRDQ8TDS7 321 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 TRUB1Q8WWH5 349 aaKnown RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 RAB24Q969Q5 203 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 OTULINQ96BN8 352 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 C7orf26Q96N11 449 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 RARRES2Q99969 163 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 BTBD10Q9BSF8 475 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 FAM103A1Q9BTL3 118 aaKnown RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 EGLN3Q9H6Z9 239 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 C12orf4Q9NQ89 552 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms