RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TMEM106BQ9NUM4 274 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 FLRT3Q9NZU0 649 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 LAMTOR2Q9Y2Q5 125 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 IGLV3-16A0A075B6K0 115 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 PRR32B1ATL7 298 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 SH2D1BO14796 132 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 XRCC2O43543 280 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 MT-CO3P00414 261 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 TACSTD2P09758 323 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 EMP2P54851 167 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 SUPT4H1P63272 117 aaKnown RBP5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 RHOGP84095 191 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 C1orf61Q13536 156 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 ALG10Q5BKT4 473 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 MRPL21Q7Z2W9 205 aaKnown RBP5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 TRAPPC6BQ86SZ2 158 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 SGPP2Q8IWX5 399 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 OR52E2Q8NGJ4 325 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 FGFBP3Q8TAT2 258 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 TMEM239Q8WW34 195 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 TMEM234Q8WY98 164 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 PINX1Q96BK5 328 aaKnown RBP5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF581Q9P0T4 197 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 LAMP3Q9UQV4 416 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 TRAV27A0A087WT01 109 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 TRAV24A0A0B4J272 114 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 CEACAM18A8MTB9 384 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 C5orf67F2Z3F1 127 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 K7EN84 100 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 FGF17O60258 216 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 EML2O95834 649 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 CT45A8P0DMV1 189 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 CT45A9P0DMV2 189 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 SPINT3P49223 89 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 UBE2NP61088 152 aaKnown RBP5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 FAM27E3Q08E93 113 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 CT45A2Q5DJT8 189 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 FAM220AQ7Z4H9 259 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 LINC00482Q8N8I6 264 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 PIGTQ969N2 578 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 FGGYQ96C11 551 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 GABRG3Q99928 467 aa5.71□□□□□ -1.5
TSPAN3-209ENST00000560715 A0A1W2PPV9 198 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 VSTM2BA6NLU5 285 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 ARL6IP1Q15041 203 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 FAM78AQ5JUQ0 283 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 UNQ5815/PRO19632Q6UWF5 114 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF550Q7Z398 422 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 GVQW1Q8N7I0 195 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 LINC01555Q8NAE3 123 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 SLC38A9Q8NBW4 561 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 OR51A7Q8NH64 312 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 BADQ92934 168 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 TMEM9BQ9NQ34 198 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 KCNE3Q9Y6H6 103 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 LRRC3CA6NJW4 275 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 TMEM212A6NML5 194 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 RNF212BA8MTL3 300 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 RHODO00212 210 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 TRAPPC6AO75865 159 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 MPV17LQ2QL34 196 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 IAH1Q2TAA2 248 aaPredicted RBP5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF260Q3ZCT1 412 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 CCSMST1Q4G0I0 132 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 SLC22A6Q4U2R8 563 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 LY6G5CQ5SRR4 150 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 Q6ZVH6 145 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 OR4F17Q8NGA8 305 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 OR4B1Q8NGF8 309 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 OR4F5Q8NH21 305 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 CLDND2Q8NHS1 167 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNRF4Q8WWF5 429 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 IL22RA2Q969J5 263 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 PTX4Q96A99 478 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 RBMXL1Q96E39 390 aaKnown RBP5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 OR4F4Q96R69 305 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 GLIPR2Q9H4G4 154 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 SDF2L1Q9HCN8 221 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 UQCR10Q9UDW1 63 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 ADAM29Q9UKF5 820 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 WIPI2Q9Y4P8 454 aa5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 MRPS18BQ9Y676 258 aaKnown RBP5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 CHD3Q12873 2000 aaKnown RBP5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 MKI67P46013 3256 aaKnown RBP5.7□□□□□ -1.5
TSPAN3-209ENST00000560715 MAP1LC3B2A6NCE7 125 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 PLPP1O14494 284 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 GPR137BO60478 399 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 HMGN2P05204 90 aaKnown RBP5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 CD55P08174 381 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 HIST1H1CP16403 213 aaKnown RBP5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 DUSP3P51452 185 aaPredicted RBP5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF92Q03936 586 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 FNDC7Q5VTL7 733 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 WDR25Q64LD2 544 aaPredicted RBP5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 TMEM215Q68D42 235 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF676Q8N7Q3 588 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 OR51A4Q8NGJ6 313 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 OR51G1Q8NGK1 321 aa5.69□□□□□ -1.5
TSPAN3-209ENST00000560715 OR10AC1Q8NH08 325 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms