RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FAM90A26D6RGX4 464 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 VSIG10L2P0DP72 767 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 CCL4P13236 92 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 CXCL2P19875 107 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 MAS1LP35410 378 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 ROM1Q03395 351 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 HIKESHIQ53FT3 197 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 C9orf40Q8IXQ3 194 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 GCSAMQ8N6F7 178 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 TRBV5-5A0A0J9YX44 114 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 TMEM189A5PLL7 270 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 TCF21O43680 179 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 ASAH2BP0C7U1 165 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 HSPB9Q9BQS6 159 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 TOGARAM1Q9Y4F4 1720 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 FER1L6Q2WGJ9 1857 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 TMSB15BA0A087X1C1 80 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 TRAV39A0A0B4J263 110 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 CXorf65A6NEN9 183 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 CLDN14O95500 239 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 NTN1O95631 604 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 RCC1P18754 421 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 SMUG1Q53HV7 270 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 STPG3Q8N7X2 389 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 SLC25A10Q9UBX3 287 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 GAGE10A6NGK3 116 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 NMUP48645 174 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 ERVFRD-1P60508 538 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 IFITM3Q01628 133 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 C21orf62-AS1Q17RA5 79 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 C1orf100Q5SVJ3 147 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 TMEM78Q5T7P6 136 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 RGP1Q92546 391 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 RAB37Q96AX2 223 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 LOC102724200A0A096LPH7 203 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 FOXS1O43638 330 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 HOXD4P09016 255 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 TSPAN7P41732 249 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 TCTAP57738 103 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 MDP1Q86V88 176 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 AURKAIP1Q9NWT8 199 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 FABP2P12104 132 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 IBA57Q5T440 356 aaKnown RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF660Q6AZW8 331 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 DYNLRB2Q8TF09 96 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF385AQ96PM9 386 aaKnown RBP11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 OR2J1Q9GZK6 312 aa11.47□□□□□ -0.57
CSPG4P11-201ENST00000560634 DSPPQ9NZW4 1301 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 DHRS7CA6NNS2 312 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 NDUFB4O95168 129 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 IFI6P09912 130 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 RUNX1Q01196 453 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 P2RY6Q15077 328 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 DCAF10Q5QP82 559 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 AMMECR1LQ6DCA0 310 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF841Q6ZN19 808 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF502Q8TBZ5 544 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 CDX2Q99626 313 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 HDHD3Q9BSH5 251 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 SIRT4Q9Y6E7 314 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 LNP1A1A4G5 178 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 HTN1P15515 57 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 ADIPOQQ15848 244 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 MMD2Q8IY49 270 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 PUSL1Q8N0Z8 303 aaKnown RBP11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF721Q8TF20 911 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 MARVELD3Q96A59 401 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 PRSS27Q9BQR3 290 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 OR51M1Q9H341 326 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF71Q9NQZ8 489 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
CSPG4P11-201ENST00000560634 J3KRW8 73 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 CDK2AP1O14519 115 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 AGFG2O95081 481 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 MTURNQ8N3F0 131 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 OR4A5Q8NH83 315 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 RHOVQ96L33 236 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 SF3B6Q9Y3B4 125 aaKnown RBP11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 NRAPQ86VF7 1730 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 OR4C46A6NHA9 309 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 C3AR1Q16581 482 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 GUCA2BQ16661 112 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 DCAF12L2Q5VW00 463 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 RSG1Q9BU20 258 aa11.46□□□□□ -0.58
CSPG4P11-201ENST00000560634 A0A1W2PS18 150 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 ISG15P05161 165 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 RNF224P0DH78 156 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 COL10A1Q03692 680 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 TMEM45BQ96B21 275 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 AQP10Q96PS8 301 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 IGHV5-10-1A0A0J9YXX1 117 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 KBTBD11O94819 623 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 LINC00869P0C866 280 aa11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
CSPG4P11-201ENST00000560634 ZNF441Q8N8Z8 693 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms