RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CEACAM3P40198 252 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 ZNF134P52741 427 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 SSX2Q16385 188 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 TPTE2P1Q5T6R2 138 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 OR10X1Q8NGY0 326 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 C15orf40Q8WUR7 153 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 SNAPC3Q92966 411 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 ABHD1Q96SE0 405 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 ESM1Q9NQ30 184 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 IFT46Q9NQC8 304 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 DNAJC9-AS1A6NH13 148 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 SULT1C2O00338 296 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 ITGB1BP1O14713 200 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 BET1O15155 118 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 TNFSF8P32971 234 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 ZNF137PP52743 207 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 RIPPLY3P57055 190 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 OR2AK2Q8NG84 335 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 TOMM40LQ969M1 308 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 JMJD8Q96S16 334 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 TOLLIPQ9H0E2 274 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 HILPDAQ9Y5L2 63 aa17.52■□□□□ 0.4
SNX1-206ENST00000559389 SVEP1Q4LDE5 3571 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 OOSP1A8MZH6 123 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 HOXA3O43365 443 aaPredicted RBP17.51■□□□□ 0.39
SNX1-206ENST00000559389 VENTXO95231 258 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 CEACAM6P40199 344 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 BAMBIQ13145 260 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 AANATQ16613 207 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 PYHIN1Q6K0P9 492 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 ZDHHC22Q8N966 263 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 OR10J5Q8NHC4 309 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 SSMEM1Q8WWF3 244 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 EDARADDQ8WWZ3 215 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 IFI27L2Q9H2X8 130 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 RDH8Q9NYR8 311 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 RABL2AQ9UBK7 228 aaPredicted RBP17.51■□□□□ 0.39
SNX1-206ENST00000559389 RABL2BQ9UNT1 228 aa17.51■□□□□ 0.39
SNX1-206ENST00000559389 VGLL3A8MV65 326 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 FCER2P06734 321 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 CTXN2P0C2S0 81 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 NAT1P18440 290 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 IL3RAP26951 378 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 S100A5P33763 92 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 IER3P46695 156 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 LRRC75BQ2VPJ9 315 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 H1FOOQ8IZA3 346 aaPredicted RBP17.5■□□□□ 0.39
SNX1-206ENST00000559389 ST6GALNAC6Q969X2 333 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 RPEQ96AT9 228 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 GINS4Q9BRT9 223 aa17.5■□□□□ 0.39
SNX1-206ENST00000559389 CLDN34H7C241 214 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 HSD17B6O14756 317 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 ST8SIA5O15466 376 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 IGHV4-59P01825 116 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 RCVRNP35243 200 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 RAB7AP51149 207 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 DYNLT3P51808 116 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 ARPC4P59998 168 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 MRPS10P82664 201 aaKnown RBP17.49■□□□□ 0.39
SNX1-206ENST00000559389 IL18Q14116 193 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 DIAPH2-AS1Q14236 149 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 PLA1AQ53H76 456 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 RNASE12Q5GAN4 147 aaKnown RBP17.49■□□□□ 0.39
SNX1-206ENST00000559389 ODF3L1Q8IXM7 274 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 LYG1Q8N1E2 194 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 TMEM86BQ8N661 226 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 SOSTQ9BQB4 213 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 C11orf54Q9H0W9 315 aaPredicted RBP17.49■□□□□ 0.39
SNX1-206ENST00000559389 POMT1Q9Y6A1 747 aa17.49■□□□□ 0.39
SNX1-206ENST00000559389 A0A1W2PPI3 338 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 CTDSPLO15194 276 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 ZNF816Q0VGE8 651 aaPredicted RBP17.48■□□□□ 0.39
SNX1-206ENST00000559389 SLC9A3R2Q15599 337 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 CNPY1Q3B7I2 92 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 CCDC144NLQ6NUI1 221 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 CCDC190Q86UF4 302 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 OR5AP2Q8NGF4 316 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 OR6Q1Q8NGQ2 317 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 OR52I2Q8NH67 350 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 SMIM4Q8WVI0 70 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 SSX3Q99909 188 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 AGMATQ9BSE5 352 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 DPAGT1Q9H3H5 408 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 V9GYH0 126 aa17.48■□□□□ 0.39
SNX1-206ENST00000559389 H3BUX3 64 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 GABARAPH6UMI1 98 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 UBA52P62987 128 aaKnown RBP17.47■□□□□ 0.39
SNX1-206ENST00000559389 DGCR2P98153 550 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 OR8H3Q8N146 312 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 OR5R1Q8NH85 324 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 FAM216AQ8WUB2 273 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 DUX5Q96PT3 197 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 NECAP2Q9NVZ3 263 aa17.47■□□□□ 0.39
SNX1-206ENST00000559389 SAA2-SAA4A0A096LPE2 208 aa17.46■□□□□ 0.39
SNX1-206ENST00000559389 BTBD17A6NE02 478 aa17.46■□□□□ 0.39
SNX1-206ENST00000559389 FABP12A6NFH5 140 aa17.46■□□□□ 0.39
SNX1-206ENST00000559389 LANCL1O43813 399 aa17.46■□□□□ 0.39
SNX1-206ENST00000559389 SAA2P0DJI9 122 aaPredicted RBP17.46■□□□□ 0.39
SNX1-206ENST00000559389 ARHGDIBP52566 201 aa17.46■□□□□ 0.39
SNX1-206ENST00000559389 TAS2R46P59540 309 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms