RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 MYL12AP19105 171 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CD34P28906 385 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CRABP1P29762 137 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CCR7P32248 378 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 SCN1AP35498 2009 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 SLCO1A2P46721 670 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 SNAP25P60880 206 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CXCR4P61073 352 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 HERVK_113P63121 156 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 REEP5Q00765 189 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 FABP5Q01469 135 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 BSPH1Q075Z2 132 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 TMEM267Q0VDI3 215 aaPredicted RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 MOBPQ13875 183 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CASP8Q14790 479 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 JOSD1Q15040 202 aaPredicted RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 MMDQ15546 238 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 BATFQ16520 125 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 HIST2H3PS2Q5TEC6 136 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 C9orf84Q5VXU9 1444 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 ZNF660Q6AZW8 331 aaPredicted RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 OR10K2Q6IF99 312 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 LCN8Q6JVE9 175 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CD200R1LQ6Q8B3 271 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CCDC121Q6ZUS5 278 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 LYZL2Q7Z4W2 148 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 TRAPPC5Q8IUR0 188 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 H1FOOQ8IZA3 346 aaPredicted RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 HS3ST5Q8IZT8 346 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 YIPF7Q8N8F6 280 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 BPIFB6Q8NFQ5 453 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 OR1P1Q8NH06 330 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 HAVCR2Q8TDQ0 301 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 Q8WTZ3 238 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 EEF1AKMT1Q8WVE0 214 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 CHMP6Q96FZ7 201 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 PYURFQ96I23 114 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 STACQ99469 402 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 RTBDNQ9BSG5 229 aaPredicted RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 TMEM109Q9BVC6 243 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 RSPO3Q9BXY4 272 aaPredicted RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 FAM96AQ9H5X1 160 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 C11orf49Q9H6J7 331 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 TRIM45Q9H8W5 580 aaPredicted RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 UCK1Q9HA47 277 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 ZNF286AQ9HBT8 521 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 HRASLSQ9HDD0 168 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 ASF1BQ9NVP2 202 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 ZNF492Q9P255 531 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 RPUSD1Q9UJJ7 312 aaKnown RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 LOXHD1Q8IVV2 1947 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 DNMT1P26358 1616 aaKnown RBP1.36□□□□□ -2.19
GABPB1-209ENST00000559100 TUBGCP6Q96RT7 1819 aa1.36□□□□□ -2.19
GABPB1-209ENST00000559100 MYO10Q9HD67 2058 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 IGKV1OR2-108A0A075B7D4 117 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 A0A1W2PQ67 120 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 LINC00862A6NCI5 91 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 LRCOL1A6NCL2 159 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 C4orf51C9J302 202 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 H3BMM0 161 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 H3BQ85 93 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 GSTZ1O43708 216 aaPredicted RBP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 SLC25A20O43772 301 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 SH2D1AO60880 128 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 DEDDO75618 318 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 IGHV3-53P01767 116 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 REG1AP05451 166 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 SERPINA6P08185 405 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 UCHL3P15374 230 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 AZU1P20160 251 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 DDTP30046 118 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 HSPA9P38646 679 aaKnown RBP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 PMELP40967 661 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 OMPP47874 163 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 OR1E2P47887 323 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 AKR1C2P52895 323 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 KRTAP10-8P60410 259 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 RPS11P62280 158 aaKnown RBP eCLIP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 HLA-DRB3P79483 266 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 FLI1Q01543 452 aaPredicted RBP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 FADDQ13158 208 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 EBPQ15125 230 aaKnown RBP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 PDGFRLQ15198 375 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 SPA17Q15506 151 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 LY6EQ16553 131 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 IMPG1Q17R60 797 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 LRRC26Q2I0M4 334 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 TMEM176BQ3YBM2 270 aaPredicted RBP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 ACSBG2Q5FVE4 666 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 TMEM31Q5JXX7 168 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 CYHR1Q6ZMK1 362 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 Q6ZQT7 251 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 TMEM136Q6ZRR5 245 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 Q6ZRU5 148 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 NIT1Q86X76 327 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 BAP18Q8IXM2 172 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 UBE2WQ96B02 151 aa1.35□□□□□ -2.19
GABPB1-209ENST00000559100 C12orf43Q96C57 262 aaKnown RBP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 TMA16Q96EY4 203 aaKnown RBP1.35□□□□□ -2.19
GABPB1-209ENST00000559100 ANKRD36BP1Q96IX9 119 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms