RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 UCP3P55916 312 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 SPANXN5Q5MJ07 72 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 ABLIM2Q6H8Q1 611 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 ETFRF1Q6IPR1 90 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 SLC25A47Q6Q0C1 308 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 PIP4P1Q86T03 277 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 ODF3L1Q8IXM7 274 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 KIR2DL5AQ8N109 375 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 CISD2Q8N5K1 135 aaKnown RBP4.35□□□□□ -1.71
HMG20A-204ENST00000558288 CMTM2Q8TAZ6 248 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 VN1R17PQ8TDU5 208 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 DNASE2BQ8WZ79 361 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 SPTSSAQ969W0 71 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 C11orf1Q9H5F2 150 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 DNAJC4Q9NNZ3 241 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 CCL28Q9NRJ3 127 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 PSENENQ9NZ42 101 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 ZFHX4Q86UP3 3567 aa4.35□□□□□ -1.71
HMG20A-204ENST00000558288 ZNF814B7Z6K7 855 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PDCD6O75340 191 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 MSR1P21757 451 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 S100GP29377 79 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 GCH1P30793 250 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 YPEL5P62699 121 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 MRPS11P82912 194 aaKnown RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 ID3Q02535 119 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 CFHR1Q03591 330 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 GAGE1Q13065 139 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 TMEM183BQ1AE95 376 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 OR8G2PQ6IF36 304 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 OR1K1Q8NGR3 316 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PIGCQ92535 297 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 TMEM56Q96MV1 263 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 BBC3Q96PG8 261 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 SIGLEC12Q96PQ1 595 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 MIEN1Q9BRT3 115 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 SAMD10Q9BYL1 202 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 METTL7AQ9H8H3 244 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 MSL2Q9HCI7 577 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 ASCL3Q9NQ33 180 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 MANBALQ9NQG1 85 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 FOXJ2Q9P0K8 574 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 RNF150Q9ULK6 438 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 MRPS18CQ9Y3D5 142 aaKnown RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 TMEM56-RWDD3S4R434 201 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 A0A0U1RQV5 110 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 NPIPB13A6NJU9 1138 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 CD300LBA8K4G0 201 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 NPIPB4C9JG80 1138 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 ETV2O00321 342 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 TRAF3IP2O43734 574 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 EPHA8P29322 1005 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 CAPZBP47756 277 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PDLIM4P50479 330 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 RAB7AP51149 207 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 DUSP3P51452 185 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PAX9P55771 341 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PPP1CBP62140 327 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 HBG1P69891 147 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 HBG2P69892 147 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PMP22Q01453 160 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 RNF151Q2KHN1 245 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 TDRG1Q3Y452 100 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 FAM69BQ5VUD6 431 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PLCXD3Q63HM9 321 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 TMPRSS7Q7RTY8 843 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 TIPARPQ7Z3E1 657 aaKnown RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PRR18Q8N4B5 295 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 GATAD1Q8WUU5 269 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 SPSB1Q96BD6 273 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 ANAPC16Q96DE5 110 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 PYGO2Q9BRQ0 406 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 RYDENQ9NUL5 291 aaKnown RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 ARHGAP21Q5T5U3 1957 aa4.34□□□□□ -1.71
HMG20A-204ENST00000558288 USP9XQ93008 2570 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-204ENST00000558288 IGKV1-27A0A075B6S5 117 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 IGHV3-15A0A0B4J1V0 119 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF816-ZNF321PA0A0X1KG74 233 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 C20orf202A1L168 122 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 AQP7O14520 342 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 EFNA2O43921 213 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 NUPR1O60356 82 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 TNFSF15O95150 251 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 NRASP01111 189 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 CRYABP02511 175 aaKnown RBP4.34□□□□□ -1.72
HMG20A-204ENST00000558288 SCTP09683 121 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 HNF1AP20823 631 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 CHRNB4P30926 498 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 TPPP2P59282 170 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 COL5A1-AS1Q5SY13 56 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 ALKBH2Q6NS38 261 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 TCF23Q7RTU1 214 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 IFI44Q8TCB0 444 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 MBD3L1Q8WWY6 194 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 ABHD14BQ96IU4 210 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 OXGR1Q96P68 337 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 HSPB9Q9BQS6 159 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 FAM103A1Q9BTL3 118 aaKnown RBP4.34□□□□□ -1.72
HMG20A-204ENST00000558288 ZDHHC11Q9H8X9 412 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms