RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 ZNF816Q0VGE8 651 aaPredicted RBP10.49□□□□□ -0.73
LDLR-205ENST00000557933 OR4F5Q8NH21 305 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 OR4F4Q96R69 305 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 OPA3Q9H6K4 179 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 DEPPQ9NTK1 212 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 CLN8Q9UBY8 286 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 IGLV3-32A0A0A0MS00 114 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 ZNF737O75373 536 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 PDGFBP01127 241 aaPredicted RBP10.49□□□□□ -0.73
LDLR-205ENST00000557933 CFIP05156 583 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 GDF1P27539 372 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 LTC4SQ16873 150 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 NCR3LG1Q68D85 454 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 TMEM211Q6ICI0 200 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 MRPL21Q7Z2W9 205 aaKnown RBP10.49□□□□□ -0.73
LDLR-205ENST00000557933 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
LDLR-205ENST00000557933 TPRX1Q8N7U7 411 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 TMEM105Q8N8V8 129 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 RNF138Q8WVD3 245 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 SDSLQ96GA7 329 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 GPR35Q9HC97 309 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 ZNF318Q5VUA4 2279 aa10.49□□□□□ -0.73
LDLR-205ENST00000557933 ZNF716A6NP11 495 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 CD300LBA8K4G0 201 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 TRAPPC2LH3BP13 241 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 RAMP3O60896 148 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 IGKV1-5P01602 117 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 CA6P23280 308 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 UCP1P25874 307 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 SSX2Q16385 188 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 BTNL3Q6UXE8 466 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 SLC35E3Q7Z769 313 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 OR10J5Q8NHC4 309 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 PSMF1Q92530 271 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 C19orf25Q9UFG5 118 aaPredicted RBP10.48□□□□□ -0.73
LDLR-205ENST00000557933 FAM166BA8MTA8 275 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 COX6A1P12074 109 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 CD81P60033 236 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 RAC1P63000 192 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 PCSK4Q6UW60 755 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 MRPL41Q8IXM3 137 aaKnown RBP10.48□□□□□ -0.73
LDLR-205ENST00000557933 DERL1Q9BUN8 251 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 DUSP23Q9BVJ7 150 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 C12orf49Q9H741 205 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 SLC39A9Q9NUM3 307 aa10.48□□□□□ -0.73
LDLR-205ENST00000557933 IGHV1-45A0A0A0MS14 117 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 C9J4A7 227 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 SYNGR2O43760 224 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 CYB5R3P00387 301 aaPredicted RBP10.47□□□□□ -0.73
LDLR-205ENST00000557933 NR2C1P13056 603 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 MDH2P40926 338 aaKnown RBP10.47□□□□□ -0.73
LDLR-205ENST00000557933 LPAL2Q16609 132 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 CST9LP1Q5W188 147 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 TCF23Q7RTU1 214 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 GGNQ86UU5 652 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 OR10A7Q8NGE5 316 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 ADGRG7Q96K78 797 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 NOSIPQ9Y314 301 aaKnown RBP10.47□□□□□ -0.73
LDLR-205ENST00000557933 VAMP5O95183 116 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 MAS1LP35410 378 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 UCP3P55916 312 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 PKIAP61925 76 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 ACSM6Q6P461 480 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 TUSC5Q8IXB3 177 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 ZNF525Q8N782 197 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 KDF1Q8NAX2 398 aaPredicted RBP10.47□□□□□ -0.73
LDLR-205ENST00000557933 SVEP1Q4LDE5 3571 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 TECTAO75443 2155 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 A0A087WWC5 75 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 LY6G6EA0A0G2JKS1 128 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 KLF7O75840 302 aaPredicted RBP10.47□□□□□ -0.73
LDLR-205ENST00000557933 IL18BPO95998 194 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 G6PCP35575 357 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 TFF3Q07654 80 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 MRPL14Q6P1L8 145 aaKnown RBP10.47□□□□□ -0.73
LDLR-205ENST00000557933 FAM234AQ9H0X4 552 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 MSL2Q9HCI7 577 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 U3KQA8 63 aa10.47□□□□□ -0.73
LDLR-205ENST00000557933 ADAMTS20P59510 1910 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 TRAV24A0A0B4J272 114 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 GRIFINA4D1Z8 144 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 DEFB108AA8MXU0 73 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 NAPSAO96009 420 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 CST2P09228 141 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 ZNF883P0CG24 379 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 EPHA8P29322 1005 aaPredicted RBP10.46□□□□□ -0.73
LDLR-205ENST00000557933 GALR1P47211 349 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 RAC3P60763 192 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 MRPL30Q8TCC3 161 aaKnown RBP10.46□□□□□ -0.73
LDLR-205ENST00000557933 PRSS50Q9UI38 385 aa10.46□□□□□ -0.73
LDLR-205ENST00000557933 IGHV3-43A0A0B4J1X8 118 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 H7BYZ3 331 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 SLC31A2O15432 143 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 NUPR1O60356 82 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 PAGE4O60829 102 aa10.46□□□□□ -0.74
LDLR-205ENST00000557933 IFNA10P01566 189 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms