RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 HERPUD1Q15011 391 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 AANATQ16613 207 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 PNLIPRP3Q17RR3 467 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 Q3ZCU0 254 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 TMEM69Q5SWH9 247 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 STEAP3Q658P3 488 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 MZT2AQ6P582 158 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 SLC25A48Q6ZT89 311 aaKnown RBP11.55□□□□□ -0.56
USP3-205ENST00000557884 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 OR2AK2Q8NG84 335 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 AP3S1Q92572 193 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 ABHD14AQ9BUJ0 271 aa11.55□□□□□ -0.56
USP3-205ENST00000557884 HSD17B6O14756 317 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 ST8SIA5O15466 376 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 YPEL1O60688 119 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 RGS11O94810 467 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 APOA1P02647 267 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 FCER2P06734 321 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 ELK1P19419 428 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 IL3RAP26951 378 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 SOX6P35712 828 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 CEACAM6P40199 344 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 KIR2DS4P43632 304 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 TAS2R20P59543 309 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 KIR2DS1Q14954 304 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 IGSF11Q5DX21 431 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 LYG1Q8N1E2 194 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 OR4A4PQ8NGN8 299 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 DYNC2LI1Q8TCX1 351 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 GCDHQ92947 438 aaPredicted RBP11.54□□□□□ -0.56
USP3-205ENST00000557884 YPEL2Q96QA6 119 aa11.54□□□□□ -0.56
USP3-205ENST00000557884 MRPS7Q9Y2R9 242 aaKnown RBP11.54□□□□□ -0.56
USP3-205ENST00000557884 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 MEIS3P1A6NDR6 274 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 OOSP1A8MZH6 123 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 TIMM23O14925 209 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 CRYBA1P05813 215 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 ZBTB25P24278 435 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 ARHGDIBP52566 201 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 PITPNAQ00169 270 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 DHRS7BQ6IAN0 325 aaPredicted RBP11.53□□□□□ -0.56
USP3-205ENST00000557884 CCDC144NLQ6NUI1 221 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 DRAM1Q8N682 238 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 GVQW1Q8N7I0 195 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 OR56B4Q8NH76 319 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 CAPSLQ8WWF8 208 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 RBM38Q9H0Z9 239 aaKnown RBP11.53□□□□□ -0.56
USP3-205ENST00000557884 CCDC59Q9P031 241 aaKnown RBP11.53□□□□□ -0.56
USP3-205ENST00000557884 TCF19Q9Y242 345 aa11.53□□□□□ -0.56
USP3-205ENST00000557884 STAB1Q9NY15 2570 aa11.52□□□□□ -0.56
USP3-205ENST00000557884 IGHV3-72A0A0B4J1Y9 119 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 A6NDX4 124 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 CHST1O43916 411 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 GAPDHP04406 335 aaKnown RBP11.52□□□□□ -0.57
USP3-205ENST00000557884 BRS3P32247 399 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 OR3A3P47888 321 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 RAB7AP51149 207 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 DYNLT3P51808 116 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 CCBE1Q6UXH8 406 aaPredicted RBP11.52□□□□□ -0.57
USP3-205ENST00000557884 MOB3BQ86TA1 216 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 CMTM3Q96MX0 182 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 CABLES2Q9BTV7 478 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 C11orf54Q9H0W9 315 aaPredicted RBP11.52□□□□□ -0.57
USP3-205ENST00000557884 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 RDH8Q9NYR8 311 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 C1RLQ9NZP8 487 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 RNF150Q9ULK6 438 aa11.52□□□□□ -0.57
USP3-205ENST00000557884 TENM1Q9UKZ4 2725 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 IGHV1-3A0A0C4DH29 117 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 SMIM31A0A1B0GVY4 71 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 CTDSP2O14595 271 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 RGS5O15539 181 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 HKR1P10072 659 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 RELBQ01201 579 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 ZNF816Q0VGE8 651 aaPredicted RBP11.51□□□□□ -0.57
USP3-205ENST00000557884 SRSF7Q16629 238 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP3-205ENST00000557884 LY6G6FQ5SQ64 297 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 Q6ZS49 121 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 TGIF2LXQ8IUE1 241 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 SNX29P2Q8IUI4 249 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 LAX1Q8IWV1 398 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 ODF3L1Q8IXM7 274 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 OR10J5Q8NHC4 309 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 RTN4IP1Q8WWV3 396 aaPredicted RBP11.51□□□□□ -0.57
USP3-205ENST00000557884 CFHR4Q92496 578 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 ST6GALNAC6Q969X2 333 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 RBMXL1Q96E39 390 aaKnown RBP11.51□□□□□ -0.57
USP3-205ENST00000557884 ABHD14BQ96IU4 210 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 GINS4Q9BRT9 223 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 MIXL1Q9H2W2 232 aa11.51□□□□□ -0.57
USP3-205ENST00000557884 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
USP3-205ENST00000557884 SAA2-SAA4A0A096LPE2 208 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms