RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 OTOGLQ3ZCN5 2332 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 CABIN1Q9Y6J0 2220 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 A0A0G2JMM0 328 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 A0A1W2PPB8 328 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 A0A1W2PRS3 328 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 ANKRD30BLA7E2S9 258 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 KIR3DP1A8MWS1 328 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 METTL15P1P0C7V9 234 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 IL2RGP31785 369 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 GFRA1P56159 465 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-232ENST00000557487 WIPI1Q5MNZ9 446 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-232ENST00000557487 Q6ZRM9 215 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 BATF2Q8N1L9 274 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 OR4X1Q8NH49 305 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 ABHD3Q8WU67 409 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 TAF15Q92804 592 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHMT2-232ENST00000557487 ANAPC16Q96DE5 110 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 SMIM7Q9BQ49 75 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 MANBALQ9NQG1 85 aa13.84□□□□□ -0.19
SHMT2-232ENST00000557487 A0A087X0M5 115 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 TRAV24A0A0B4J272 114 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 A0A1B0GX30 115 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 SLC33A1O00400 549 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-232ENST00000557487 HSPB6O14558 160 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 TRAPPC6AO75865 159 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 PSMB3P49720 205 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 FAM3BP58499 235 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-232ENST00000557487 PDZD11Q5EBL8 140 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 LHX4Q969G2 390 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 BTF3L4Q96K17 158 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 VSIRQ9H7M9 311 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 DLL3Q9NYJ7 618 aa13.83□□□□□ -0.2
SHMT2-232ENST00000557487 GCGP01275 180 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 IGKV1-39P01597 117 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 IGKV1-5P01602 117 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 IGKV1D-39P04432 117 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 CEACAM6P40199 344 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 ARL16Q0P5N6 197 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 CLN3Q13286 438 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 BSXQ3C1V8 233 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 TMEM14EPQ6UXP3 125 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 C20orf204Q6ZNR8 217 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 C5orf24Q7Z6I8 188 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 HAPLN4Q86UW8 402 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 ZBTB34Q8NCN2 500 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 OR1P1Q8NH06 330 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 SNX22Q96L94 193 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 OR4C12Q96R67 309 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 RBKSQ9H477 322 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 IL36RNQ9UBH0 155 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 BOKQ9UMX3 212 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-232ENST00000557487 CTXND1A0A1B0GTU2 59 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 PPP5D1E7EU14 171 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 NTN3O00634 580 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-232ENST00000557487 SYNGR1O43759 233 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 RFPL3SP0C7P2 107 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 IAPPP10997 89 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 GDF1P27539 372 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 PDLIM4P50479 330 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 PLP2Q04941 152 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 SLC38A11Q08AI6 406 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 Q8IYB0 196 aa13.82□□□□□ -0.2
SHMT2-232ENST00000557487 PATE3B3GLJ2 98 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 H7BYZ3 331 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 VENTXO95231 258 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 CCNOP22674 350 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 DUSP3P51452 185 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-232ENST00000557487 FGF8P55075 233 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-232ENST00000557487 TESK1Q15569 626 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 MSMO1Q15800 293 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 ADIRFQ15847 76 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 HLA-BQ31612 363 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 C16orf82Q7Z2V1 217 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 OR51G1Q8NGK1 321 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 RAB24Q969Q5 203 aa13.81□□□□□ -0.2
SHMT2-232ENST00000557487 ZFHX2Q9C0A1 2572 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-232ENST00000557487 J3QT63 122 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 HS3ST1O14792 307 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 SLC31A2O15432 143 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 LY86O95711 162 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 IGLV2-14P01704 120 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 SRP14P37108 136 aaKnown RBP13.8□□□□□ -0.2
SHMT2-232ENST00000557487 ACOT6Q3I5F7 207 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-232ENST00000557487 C4orf17Q53FE4 359 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 SSX7Q7RTT5 188 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 RDH5Q92781 318 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 POM121L2Q96KW2 1035 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 C2orf88Q9BSF0 95 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 TMEM147Q9BVK8 224 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 ZNF552Q9H707 407 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-232ENST00000557487 MYO15AQ9UKN7 3530 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 DMDP11532 3685 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 LNP1A1A4G5 178 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 ATXN7O15265 892 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-232ENST00000557487 HRASP01112 189 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 TYMSP04818 313 aa13.8□□□□□ -0.2
SHMT2-232ENST00000557487 FOSL1P15407 271 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms