RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 RCC1LQ96I51 464 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 ARHGAP5-AS1Q96IT6 56 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 RBM14Q96PK6 669 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 SULT4A1Q9BR01 284 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 FAAP24Q9BTP7 215 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 ATG5Q9H1Y0 275 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 RIMS4Q9H426 269 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.52□□□□□ -1.058e-8■■■□□ 16.6
HNRNPC-230ENST00000557201 ETAA1Q9NY74 926 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 TAS2R3Q9NYW6 316 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 DPM3Q9P2X0 92 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 KIF25Q9UIL4 384 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 KCNK7Q9Y2U2 307 aa8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 UBE2J1Q9Y385 318 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-230ENST00000557201 LY6LH3BQJ8 138 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 OR2F2O95006 317 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 DUS4LO95620 317 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 NAPSAO96009 420 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 APOA1P02647 267 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 LPLP06858 475 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 HIST1H1DP16402 221 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 GZMHP20718 246 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 GDNFP39905 211 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 ARSJQ5FYB0 599 aaPredicted RBP8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 UBE2NLQ5JXB2 153 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 HEPN1Q6WQI6 88 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 ETV3LQ6ZN32 361 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 CENPVQ7Z7K6 275 aaPredicted RBP8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 ZNF554Q86TJ5 538 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 RTN4RL2Q86UN3 420 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 ABHD12Q8N2K0 398 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 SAMD12Q8N8I0 201 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 S100A16Q96FQ6 103 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 PECRQ9BY49 303 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 SLIRPQ9GZT3 109 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 COMMD3Q9UBI1 195 aa8.51□□□□□ -1.05
HNRNPC-230ENST00000557201 A0A075B6Q4 140 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 TRBV6-6A0A0A6YYG2 114 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 KBTBD11-OT1A0A1B0GTJ5 212 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 UBE2QL1A1L167 161 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 A6NHS1 94 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 MFNGO00587 321 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 PF4P02776 101 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 ABCA11PQ4W5N1 156 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 UTF1Q5T230 341 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 PRAMEF5Q5TYX0 476 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 AKR1E2Q96JD6 320 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 SLC25A33Q9BSK2 321 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 NXF2Q9GZY0 626 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 GAL3ST2Q9H3Q3 398 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 C12orf4Q9NQ89 552 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 DIABLOQ9NR28 239 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 BATF3Q9NR55 127 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 MBNL3Q9NUK0 354 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 A3GALT2U3KPV4 340 aa8.5□□□□□ -1.05
HNRNPC-230ENST00000557201 A0A087X0M5 115 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 A0A1B0GX30 115 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 SH2D7A6NKC9 451 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 ZNF729A6NN14 1252 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 LEUTXA8MZ59 168 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 NPIPB11E5RHQ5 1161 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 XRCC3O43542 346 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 ORC5O43913 435 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 GSTP1P09211 210 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 GNB3P16520 340 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 CDK2P24941 298 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 BRS3P32247 399 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 HLA-DRB5Q30154 266 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 ZNF260Q3ZCT1 412 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 CDNFQ49AH0 187 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 HACD4Q5VWC8 232 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 OR52W1Q6IF63 320 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 ZNF880Q6PDB4 577 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 TRAT1Q6PIZ9 186 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 TRAPPC6BQ86SZ2 158 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 OR4X2Q8NGF9 303 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 OR13A1Q8NGR1 328 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 ZNF596Q8TC21 504 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 MRPL30Q8TCC3 161 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 CYYR1Q96J86 154 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 ZNF286AQ9HBT8 521 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 ING3Q9NXR8 418 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 AK3Q9UIJ7 227 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 TRAPPC2LQ9UL33 140 aa8.49□□□□□ -1.05
HNRNPC-230ENST00000557201 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 C15orf65H3BRN8 121 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 BUB1B-PAK6H3BSN5 160 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 HPGDSO60760 199 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 TPPPO94811 219 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 RCC1P18754 421 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 ELK1P19419 428 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 PITPNAQ00169 270 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 SRSF7Q16629 238 aaKnown RBP eCLIP8.48□□□□□ -1.051e-12■■□□□ 11.4
HNRNPC-230ENST00000557201 PNLIPRP3Q17RR3 467 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 C17orf58Q2M2W7 97 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 C6orf183Q5T699 404 aa8.48□□□□□ -1.05
HNRNPC-230ENST00000557201 TPTE2P1Q5T6R2 138 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms