RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 PPP1CCP36873 323 aaKnown RBP19.54■□□□□ 0.72
SIX4-203ENST00000556952 CBX3Q13185 183 aa19.54■□□□□ 0.72
SIX4-203ENST00000556952 ABCA11PQ4W5N1 156 aa19.54■□□□□ 0.72
SIX4-203ENST00000556952 ZNF626Q68DY1 528 aa19.54■□□□□ 0.72
SIX4-203ENST00000556952 PRSS57Q6UWY2 283 aa19.54■□□□□ 0.72
SIX4-203ENST00000556952 CAPSLQ8WWF8 208 aa19.54■□□□□ 0.72
SIX4-203ENST00000556952 SEC22CQ9BRL7 303 aa19.54■□□□□ 0.72
SIX4-203ENST00000556952 SLC5A7Q9GZV3 580 aa19.54■□□□□ 0.72
SIX4-203ENST00000556952 RPUSD1Q9UJJ7 312 aaKnown RBP19.54■□□□□ 0.72
SIX4-203ENST00000556952 F8P00451 2351 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 AKR1C4P17516 323 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 PI3P19957 117 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 OMGP23515 440 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 DHODHQ02127 395 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 LTC4SQ16873 150 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 LY6G6FQ5SQ64 297 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 CD276Q5ZPR3 534 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 HEPN1Q6WQI6 88 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 CHAC2Q8WUX2 184 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 TMEM230Q96A57 120 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 RAB39BQ96DA2 213 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 Q96MF0 132 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 OR51J1Q9H342 316 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 GFOD1Q9NXC2 390 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 ACANP16112 2415 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 IGHV3-43A0A0B4J1X8 118 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 VWC2LB2RUY7 222 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 IGHV3-43DP0DP04 118 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 CCL3L1P16619 93 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 GNRHRP30968 328 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 MORN2Q502X0 79 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 CCDC71LQ8N9Z2 235 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 SLC2A9Q9NRM0 540 aa19.53■□□□□ 0.72
SIX4-203ENST00000556952 RBM7Q9Y580 266 aaKnown RBP19.53■□□□□ 0.72
SIX4-203ENST00000556952 GPR31O00270 319 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 ITGB1BP1O14713 200 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 HLA-AP01891 365 aaKnown RBP19.52■□□□□ 0.71
SIX4-203ENST00000556952 TRAPPC2P0DI81 140 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 TRAPPC2BP0DI82 140 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 DLX6P56179 175 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 PIGPP57054 158 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 DHRS2Q13268 280 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 PPP1R1AQ13522 171 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 CLEC12BQ2HXU8 276 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 LYG2Q86SG7 212 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 LY6G5BQ8NDX9 201 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 CLDND2Q8NHS1 167 aa19.52■□□□□ 0.71
SIX4-203ENST00000556952 ZNF431Q8TF32 576 aaPredicted RBP19.52■□□□□ 0.71
SIX4-203ENST00000556952 PARP12Q9H0J9 701 aaKnown RBP19.52■□□□□ 0.71
SIX4-203ENST00000556952 YLPM1P49750 1951 aaKnown RBP19.51■□□□□ 0.71
SIX4-203ENST00000556952 RBP4P02753 201 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 RND3P61587 244 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 PRAMEF5Q5TYX0 476 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 C11orf88Q6PI97 169 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 ZNF818PQ6ZRF7 136 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 LDLRAD3Q86YD5 345 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 CMTM1Q8IZ96 169 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 AKR1E2Q96JD6 320 aa19.51■□□□□ 0.71
SIX4-203ENST00000556952 PPIAL4CA0A0B4J2A2 164 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 CRYM-AS1A6NIL9 109 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 PHF1O43189 567 aaPredicted RBP19.5■□□□□ 0.71
SIX4-203ENST00000556952 SLC22A5O76082 557 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 OR8U9P0C7N5 309 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 PPIAL4GP0DN37 164 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 S100GP29377 79 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 RRAS2P62070 204 aaPredicted RBP19.5■□□□□ 0.71
SIX4-203ENST00000556952 MSMO1Q15800 293 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 Q3ZCU0 254 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 SGPP2Q8IWX5 399 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 BVESQ8NE79 360 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 OR2AK2Q8NG84 335 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 OR52B4Q8NGK2 314 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 OR8U1Q8NH10 309 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 DMRTB1Q96MA1 342 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 MED13LQ71F56 2210 aa19.5■□□□□ 0.71
SIX4-203ENST00000556952 LOC105371242A0A075B767 164 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 C9orf170A2RU37 121 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 C17orf98A8MV24 154 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 A8MXK9 166 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 LIPFP07098 398 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 VAMP1P23763 118 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 LMO4P61968 165 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 PHLDA2Q53GA4 152 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 FAM53AQ6NSI3 398 aaPredicted RBP19.49■□□□□ 0.71
SIX4-203ENST00000556952 ZNF645Q8N7E2 425 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 RTN4IP1Q8WWV3 396 aaPredicted RBP19.49■□□□□ 0.71
SIX4-203ENST00000556952 MED28Q9H204 178 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 CCL28Q9NRJ3 127 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 MALRD1Q5VYJ5 2156 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 ZANQ9Y493 2812 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 CR1P17927 2039 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 HMX3A6NHT5 357 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 C22orf46C9J442 243 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 HSD17B6O14756 317 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 SSNA1O43805 119 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 NFYBP25208 207 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 RAB7AP51149 207 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 KCNS2Q9ULS6 477 aa19.49■□□□□ 0.71
SIX4-203ENST00000556952 KIAA1324LA8MWY0 1029 aaPredicted RBP19.48■□□□□ 0.71
SIX4-203ENST00000556952 MMP23AO75900 390 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms