RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 CGB1A6NKQ9 187 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 COL8A1P27658 744 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 SUCLG1P53597 346 aaKnown RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 RALYQ9UKM9 306 aaKnown RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 A0A1W2PS18 150 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 ODAMA1E959 279 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 OR5AL1P0C617 328 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 TNFSF10P50591 281 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 NANOS3P60323 173 aaKnown RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 PLAURQ03405 335 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 FAM106AQ4KMX7 169 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 IGSF11Q5DX21 431 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 TEPPQ6URK8 271 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 CYB5R1Q9UHQ9 305 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 A0A1W2PNV4 684 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 P01737 135 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 FCGR3AP08637 254 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 FUT5Q11128 374 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 CALHM1Q8IU99 346 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF738Q8NE65 137 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 SNRNP40Q96DI7 357 aaKnown RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 DUX5Q96PT3 197 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 KLK13Q9UKR3 277 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 SS18L1O75177 396 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 FAM157CP0CG43 387 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 NHLH1Q02575 133 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 NHLH2Q02577 135 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 IZUMO4Q1ZYL8 232 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 CXorf66Q5JRM2 361 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 SEZ6L2Q6UXD5 910 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 RCC2Q9P258 522 aaKnown RBP7.08□□□□□ -1.28
SYNE2-220ENST00000555612 ZDBF2Q9HCK1 2354 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 A0A0G2JMM0 328 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 A0A1W2PPB8 328 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 A0A1W2PRS3 328 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 DHRS7CA6NNS2 312 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 KIR3DP1A8MWS1 328 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 P2RY1P47900 373 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM50BP56557 158 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 DDB2Q92466 427 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 AMELYQ99218 206 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 CLEC7AQ9BXN2 247 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 SRD5A3Q9H8P0 318 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 SVILO95425 2214 aa7.08□□□□□ -1.28
SYNE2-220ENST00000555612 ICMTO60725 284 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 RPL7P18124 248 aaKnown RBP7.07□□□□□ -1.28
SYNE2-220ENST00000555612 CD1BP29016 333 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 SUMO1P63165 101 aaKnown RBP7.07□□□□□ -1.28
SYNE2-220ENST00000555612 TIMM23BQ5SRD1 257 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 MMD2Q8IY49 270 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF680Q8NEM1 530 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 ARPC4-TTLL3A0A0A6YYG9 625 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 HYPMO75409 117 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 RHBDL1O75783 438 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 ATP5G2Q06055 141 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM88Q6PEY1 159 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 OR1L6Q8NGR2 347 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 OR10J6PQ8NGY7 276 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 WNT5BQ9H1J7 359 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 A0A1W2PP11 408 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 FCN1O00602 326 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 TGOLN2O43493 480 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 SMIM10L1P0DMW3 83 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM116Q8NCL8 245 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF418Q8TF45 676 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-220ENST00000555612 SMIM10Q96HG1 83 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 RAX2Q96IS3 184 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 LHFPL6Q9Y693 200 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 A0A1W2PRX2 142 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 C11orf94C9JXX5 98 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 THY1P04216 161 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 CPN1P15169 458 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 RANP62826 216 aaKnown RBP7.07□□□□□ -1.28
SYNE2-220ENST00000555612 RPL8P62917 257 aaKnown RBP7.07□□□□□ -1.28
SYNE2-220ENST00000555612 LRRC75BQ2VPJ9 315 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 ADAD2Q8NCV1 583 aaKnown RBP7.07□□□□□ -1.28
SYNE2-220ENST00000555612 OR52M1Q8NGK5 317 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 OR9G1Q8NH87 305 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM37Q8WXS4 190 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 IL22RA2Q969J5 263 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 DPH3Q96FX2 82 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 C7orf69Q9H7B7 122 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 TUBA4BQ9H853 241 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 KCNE5Q9UJ90 142 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 IGSF23A1L1A6 192 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 CEACAM18A8MTB9 384 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 SCTP09683 121 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 SCGB1C2P0DMR2 95 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 KHDC3LQ587J8 217 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 RIPPLY2Q5TAB7 128 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 FADS6Q8N9I5 356 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 CHCHD2Q9Y6H1 151 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-220ENST00000555612 ATAD5Q96QE3 1844 aa7.07□□□□□ -1.28
SYNE2-220ENST00000555612 KIR2DL2P43627 348 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-220ENST00000555612 SULT1A1P50225 295 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 HOGA1Q86XE5 327 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM106BQ9NUM4 274 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 A0A1B0GU03 582 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms