RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 XKRXQ6PP77 449 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 OLIG3Q7RTU3 272 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 OR2M3Q8NG83 312 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 SLC37A2Q8TED4 501 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 ASB13Q8WXK3 278 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 AP3S1Q92572 193 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 PPCDCQ96CD2 204 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 CEP19Q96LK0 163 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 TLNRD1Q9H1K6 362 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 FBXL15Q9H469 300 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.86□□□□□ -1.95
VRK1-205ENST00000555402 ZNF492Q9P255 531 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 FLT4P35916 1363 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 IGHV2-26A0A0B4J1V2 119 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 FAM183AA6NL82 134 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 FSTL3O95633 263 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 IGHG2P01859 326 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 TRGV3P03979 118 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 AKR1C4P17516 323 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 MSNP26038 577 aaKnown RBP2.85□□□□□ -1.95
VRK1-205ENST00000555402 ADORA1P30542 326 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 KLF3P57682 345 aaPredicted RBP2.85□□□□□ -1.95
VRK1-205ENST00000555402 FAM3AP98173 230 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 ZNF235Q14590 738 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 HACD4Q5VWC8 232 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 TMEM215Q68D42 235 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 CALHM3Q86XJ0 350 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 PXT1Q8NFP0 134 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 GPR32P1Q8NGA4 272 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 DTD1Q8TEA8 209 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 C16orf78Q8WTQ4 265 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 RAD51AP1Q96B01 352 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 OR2V2Q96R30 315 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 TXNIPQ9H3M7 391 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 XPNPEP1Q9NQW7 623 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 POMPQ9Y244 141 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 BTRCQ9Y297 605 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.85□□□□□ -1.95
VRK1-205ENST00000555402 ICOSQ9Y6W8 199 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 NACADO15069 1562 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 DNMT1P26358 1616 aaKnown RBP2.85□□□□□ -1.95
VRK1-205ENST00000555402 ROCK1Q13464 1354 aa2.85□□□□□ -1.95
VRK1-205ENST00000555402 EIF3AQ14152 1382 aaKnown RBP2.85□□□□□ -1.95
VRK1-205ENST00000555402 IGHV3-21A0A0B4J1V1 117 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 F5H5P2 479 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 H3BQV1 296 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 KPNA3O00505 521 aaPredicted RBP2.84□□□□□ -1.95
VRK1-205ENST00000555402 CNIH1O95406 144 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 CA2P00918 260 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 OR4E1P0C645 316 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 CD99P14209 185 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 UCHL3P15374 230 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 MYL12AP19105 171 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 ZNF660Q6AZW8 331 aaPredicted RBP2.84□□□□□ -1.95
VRK1-205ENST00000555402 RASSF6Q6ZTQ3 369 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 MARCH3Q86UD3 253 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 COMMD7Q86VX2 200 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 OR4P4Q8NGL7 312 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 TEX47Q8TBZ9 253 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 PRRT1Q99946 306 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 TIPINQ9BVW5 301 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 GABARAPL1Q9H0R8 117 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 DMAC2Q9NW81 257 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 TAS2R1Q9NYW7 299 aa2.84□□□□□ -1.95
VRK1-205ENST00000555402 BAZ1BQ9UIG0 1483 aaKnown RBP2.84□□□□□ -1.96
VRK1-205ENST00000555402 IGHV3-43A0A0B4J1X8 118 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 SMIM9A6NGZ8 99 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 TCF21O43680 179 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 CFL1P23528 166 aaKnown RBP2.83□□□□□ -1.96
VRK1-205ENST00000555402 CCR7P32248 378 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 CD79BP40259 229 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 MAGEA12P43365 314 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 SULT1A1P50225 295 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 SULT1A2P50226 295 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 BAMBIQ13145 260 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 OR2F1Q13607 317 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 SLC9A3R2Q15599 337 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 MAPK14Q16539 360 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 C1orf195Q5TG92 126 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 ELP2Q6IA86 826 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 TNFAIP8L2Q6P589 184 aaPredicted RBP2.83□□□□□ -1.96
VRK1-205ENST00000555402 OR6V1Q8N148 313 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 SLC25A45Q8N413 288 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 TBC1D19Q8N5T2 526 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 NEK7Q8TDX7 302 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 FAM172AQ8WUF8 416 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 CLDN23Q96B33 292 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 OR51E2Q9H255 320 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 OR51I1Q9H343 314 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 DUSP21Q9H596 190 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 GID8Q9NWU2 228 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 ARL5AQ9Y689 179 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 A0A1W2PP64 1363 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 FHAD1B1AJZ9 1412 aa2.83□□□□□ -1.96
VRK1-205ENST00000555402 IGKV1OR2-108A0A075B7D4 117 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 TGIF2-C20orf24A0A0A6YYL0 155 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 CLDN24A6NM45 220 aa2.82□□□□□ -1.96
VRK1-205ENST00000555402 ZNF729A6NN14 1252 aaPredicted RBP2.82□□□□□ -1.96
VRK1-205ENST00000555402 H3BQ85 93 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms