RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SUPT4H1P63272 117 aaKnown RBP8.2□□□□□ -1.1
PSEN1-213ENST00000555386 PDZK1IP1Q13113 114 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 LIAT1Q6ZQX7 453 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 C6orf201Q7Z4U5 140 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 SAXO1Q8IYX7 474 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 OSR2Q8N2R0 312 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 Q8NFD4 153 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 OR1S1Q8NH92 325 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 SUN5Q8TC36 379 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 ARPC5LQ9BPX5 153 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 NECAP2Q9NVZ3 263 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 MBD2Q9UBB5 411 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 POLDIP2Q9Y2S7 368 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 ZFHX3Q15911 3703 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 TRAPPC2LH3BP13 241 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 IFNA2P01563 188 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 RLN2P04090 185 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PGA5P0DJD9 388 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SELLP14151 372 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 FOSL1P15407 271 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 DUSP1P28562 367 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 NUP62P37198 522 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 NPBWR2P48146 333 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 TMEM155Q4W5P6 130 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SIGIRRQ6IA17 410 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PRSS54Q6PEW0 395 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 DHRS11Q6UWP2 260 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 FGFRL1Q8N441 504 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 FAM216BQ8N7L0 139 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 LINC01356Q8N9X3 169 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 POC1AQ8NBT0 407 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 OR8B3Q8NGG8 313 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 OR10Z1Q8NGY1 313 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 OR51F2Q8NH61 342 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PCNPQ8WW12 178 aaKnown RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 C17orf50Q8WW18 174 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 NEIL1Q96FI4 390 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 CXorf58Q96LI9 332 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 C2orf50Q96LR7 162 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 OR8B2Q96RD0 313 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 CMSS1Q9BQ75 279 aaKnown RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PATZ1Q9HBE1 687 aaKnown RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 MTCH1Q9NZJ7 389 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 MIOXQ9UGB7 285 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 C13orf42A0A1B0GVH6 325 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 NKX6-3A6NJ46 265 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SDCBPO00560 298 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PDCD6O75340 191 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 RPLP1P05386 114 aaKnown RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 FCGR3AP08637 254 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 WNT2P09544 360 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PGAM2P15259 253 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PRKACAP17612 351 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 ZFP36P26651 326 aaKnown RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 GNB2P62879 340 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 IL24Q13007 206 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 IL15RAQ13261 267 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SLC9A3R2Q15599 337 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SRSF7Q16629 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SMIM21Q3B7S5 101 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PAN3Q58A45 887 aaKnown RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 NKAPLQ5M9Q1 402 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 ACP7Q6ZNF0 438 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SGPP2Q8IWX5 399 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 MKXQ8IYA7 352 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 BVESQ8NE79 360 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 ZNF2Q9BSG1 426 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 SSBP3Q9BWW4 388 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 ZNF471Q9BX82 626 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-213ENST00000555386 PKIBQ9C010 78 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 IL36RNQ9UBH0 155 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 CTSZQ9UBR2 303 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 GLS2Q9UI32 602 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 AK3Q9UIJ7 227 aa8.19□□□□□ -1.1
PSEN1-213ENST00000555386 IGKV1D-17A0A075B6S4 117 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 IGKV1-12A0A0C4DH73 117 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 CRYM-AS1A6NIL9 109 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 B4DSR2 109 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 F5H0A9 414 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 CD5LO43866 347 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 IGKV1D-12P01611 117 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 MSMBP08118 114 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 OR5H8P0DN80 308 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 PSG2P11465 335 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 TPT1P13693 172 aaKnown RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 MUC1P15941 1255 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 CFHR2P36980 270 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 LUMP51884 338 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 UCP3P55916 312 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 RBM11P57052 281 aaKnown RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 EIF5AP63241 154 aaKnown RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 PDCD1Q15116 288 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 TAF9Q16594 264 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 ANKRD55Q3KP44 614 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 TEX36Q5VZQ5 186 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 STUMQ69YW2 141 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms