RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 HIST1H2BHQ93079 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 MSI2Q96DH6 328 aaKnown RBP12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BNQ99877 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BMQ99879 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 MSL2Q9HCI7 577 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 NBASA2RRP1 2371 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 C1QL1O75973 258 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 CDS2O95674 445 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 PTBP3O95758 552 aaKnown RBP12.56□□□□□ -0.4
XRCC3-211ENST00000555055 NAPSAO96009 420 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 TAGLN2P37802 199 aaKnown RBP12.56□□□□□ -0.4
XRCC3-211ENST00000555055 UBE2KP61086 200 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 SRPXP78539 464 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 ZNF154Q13106 437 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 FBXW12Q6X9E4 464 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 TMEM182Q6ZP80 229 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-211ENST00000555055 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 TMEM242Q9NWH2 141 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 ZGRF1Q86YA3 2104 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 MED19A0JLT2 244 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-211ENST00000555055 RNF224P0DH78 156 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 GLIPR1P48060 266 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 EWSR1Q01844 656 aaKnown RBP eCLIP12.56□□□□□ -0.47e-7■■■□□ 14.6
XRCC3-211ENST00000555055 GNMTQ14749 295 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 ZNF674Q2M3X9 581 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 Q6ZT83 130 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 MRPL30Q8TCC3 161 aaKnown RBP12.56□□□□□ -0.4
XRCC3-211ENST00000555055 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
XRCC3-211ENST00000555055 OR1A1Q9P1Q5 309 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 DKK4Q9UBT3 224 aa12.56□□□□□ -0.4
XRCC3-211ENST00000555055 KLK10O43240 276 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 IZUMO4Q1ZYL8 232 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 TBC1D26Q86UD7 250 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 ZNF573Q86YE8 665 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 OR5R1Q8NH85 324 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 KLF14Q8TD94 323 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-211ENST00000555055 RARRES2Q99969 163 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 OBP2BQ9NPH6 170 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 IGF2RP11717 2491 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 HSPA12AO43301 675 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 CEACAM1P13688 526 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 RND3P61587 244 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 NKX6-1P78426 367 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-211ENST00000555055 SEM1Q6ZVN7 128 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 Q8NFD4 153 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 OR10D4PQ8NGN7 298 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 RNASE11Q8TAA1 199 aaKnown RBP12.55□□□□□ -0.4
XRCC3-211ENST00000555055 PLPPR1Q8TBJ4 325 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 RCC1LQ96I51 464 aaKnown RBP12.55□□□□□ -0.4
XRCC3-211ENST00000555055 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
XRCC3-211ENST00000555055 MMP24Q9Y5R2 645 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 MPC1Q9Y5U8 109 aa12.55□□□□□ -0.4
XRCC3-211ENST00000555055 TLN1Q9Y490 2541 aaKnown RBP12.55□□□□□ -0.4
XRCC3-211ENST00000555055 SPTA1P02549 2419 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 TSTD3H0UI37 97 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 WDR1O75083 606 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 HBE1P02100 147 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 TK1P04183 234 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 CXCL1P09341 107 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 DLK1P80370 383 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 NHLH2Q02577 135 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 ACSF3Q4G176 576 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-211ENST00000555055 PRAMEF6Q5VXH4 476 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 SSX9Q7RTT3 188 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 STX12Q86Y82 276 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 OR2C3Q8N628 320 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 GNPNAT1Q96EK6 184 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-211ENST00000555055 NIPSNAP3BQ9BS92 247 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 MAGT1Q9H0U3 335 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 C3orf85A0A1B0GTC6 90 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 DEGS1O15121 323 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 SCAF4O95104 1147 aaKnown RBP12.54□□□□□ -0.4
XRCC3-211ENST00000555055 MMP9P14780 707 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 CEACAM6P40199 344 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 RND2P52198 227 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 KHDC3LQ587J8 217 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 IGFL2Q6UWQ7 119 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 ZNF429Q86V71 674 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 OR51H1Q8NH63 302 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 RFNGQ9Y644 331 aa12.54□□□□□ -0.4
XRCC3-211ENST00000555055 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
XRCC3-211ENST00000555055 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 MKRN2OSH3BPM6 223 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 SLC31A2O15432 143 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 MPPED1O15442 326 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 MLNRO43193 412 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 OR2H2O95918 312 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 CECR9P0C854 216 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 ATP6V0CP27449 155 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 DDTP30046 118 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms