RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PROB1E7EW31 1015 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 PLPP3O14495 311 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ZNHIT1O43257 154 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 THY1P04216 161 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ISL1P61371 349 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 IL24Q13007 206 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 MBNL2Q5VZF2 373 aaKnown RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 R3HDMLQ9H3Y0 253 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 A0A1B0GTH9 108 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CCL8P80075 99 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 C1orf185Q5T7R7 199 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 PAQR9Q6ZVX9 377 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ARRDC1Q8N5I2 433 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 TEX29Q8N6K0 151 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 GVQW1Q8N7I0 195 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ASB10Q8WXI3 467 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 HDHD3Q9BSH5 251 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 IGHV3-66A0A0C4DH42 116 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 SFTPCP11686 197 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 SNRPD3P62318 126 aaKnown RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CDC20Q12834 499 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 UQCC3Q6UW78 93 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 SMIM4Q8WVI0 70 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ANGPTL4Q9BY76 406 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 LHX9Q9NQ69 397 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ASB1Q9Y576 335 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 TOGARAM1Q9Y4F4 1720 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 A0A1B0GV72 72 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 SNURFLB1AK76 121 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 PAGE4O60829 102 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 MBPP02686 304 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 GPX2P18283 190 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 MFAP2P55001 183 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 GLDNQ6ZMI3 551 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 SLC16A13Q7RTY0 426 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 C2orf88Q9BSF0 95 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 OR2H1Q9GZK4 316 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 OPN3Q9H1Y3 402 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CA10Q9NS85 328 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 MYLKQ15746 1914 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 IGHV3OR16-13A0A075B7E8 117 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 IGHV3-74A0A0B4J1X5 117 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 MMP9P14780 707 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 TMPRSS3P57727 454 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 VSTM2LQ96N03 204 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 SAA1P0DJI8 122 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 NPBWR2P48146 333 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 SCMH1Q96GD3 660 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 LINC00470Q9BZP3 86 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 A0A0B4J2E0 115 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 A0A1B0GX12 115 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 EPPINO95925 133 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 OR8B12Q8NGG6 310 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 LSM10Q969L4 123 aaKnown RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 ALG14Q96F25 216 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 PLA2G2FQ9BZM2 168 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 IL36RNQ9UBH0 155 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 ETHE1O95571 254 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 EVX1P49640 407 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 PRSS54Q6PEW0 395 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 RNF122Q9H9V4 155 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 RICTORQ6R327 1708 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 IGHV3-23P01764 117 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 INHBBP09529 407 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 ZFP36L2P47974 494 aaKnown RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 OR10AC1Q8NH08 325 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 ANAPC16Q96DE5 110 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 WNT16Q9UBV4 365 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 CREBBPQ92793 2442 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 HOXA3O43365 443 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM177Q53S58 311 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 NCMAPQ5T1S8 102 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 C10orf128Q5T292 105 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 ADAMTS17Q8TE56 1095 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 SHISA4Q96DD7 197 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 MAP1LC3AQ9H492 121 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 MUC4Q99102 2169 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 CLDN14O95500 239 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 HMGA1P17096 107 aaKnown RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 RELQ04864 619 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 AWAT1Q58HT5 328 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF714Q96N38 554 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 DUX3Q96PT4 197 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF275Q9NSD4 429 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 SPTY2D1-AS1A0A0U1RR47 76 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 IL13RA2Q14627 380 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 PTP4A1Q93096 173 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 PRSS27Q9BQR3 290 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 NXT2Q9NPJ8 142 aaKnown RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 EXOGQ9Y2C4 368 aaKnown RBP6.03□□□□□ -1.44
SYNE2-216ENST00000555002 MED13Q9UHV7 2174 aa6.03□□□□□ -1.44
SYNE2-216ENST00000555002 FCARP24071 287 aa6.02□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF383Q8NA42 475 aa6.02□□□□□ -1.44
SYNE2-216ENST00000555002 GPBAR1Q8TDU6 330 aa6.02□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF646O15015 1829 aaPredicted RBP6.02□□□□□ -1.44
SYNE2-216ENST00000555002 CEACAM18A8MTB9 384 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 CEACAM4O75871 244 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 ALX3O95076 343 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 RNASE4P34096 147 aaKnown RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 FHL5Q5TD97 284 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms