RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ZFP30Q9Y2G7 519 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 HINT1P49773 126 aaPredicted RBP12.12□□□□□ -0.47
VTI1B-204ENST00000554659 MCM3APO60318 1980 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 IGKV3-7A0A075B6H7 116 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 P2RY4P51582 365 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 CEACAM21Q3KPI0 293 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 HIKESHIQ53FT3 197 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 NHLRC3Q5JS37 347 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FBXW9Q5XUX1 488 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 OR1N2Q8NGR9 330 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 LRRC3BQ96PB8 259 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 NUDT16L1Q9BRJ7 211 aaKnown RBP12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A10PA6NDY2 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A18PA6NE21 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A16PA6NEW6 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A20PA6NIJ5 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A8PA6NJQ4 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A7PA6NKC0 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A22PA8MWA6 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A12PA8MX19 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A5PA8MXJ8 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A23PA8MXZ1 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 M0R296 226 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 PIN1P1O15428 100 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A15PP0C7V4 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A13PP0C7W8 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A14PP0C7W9 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FAM90A24PP0C7X0 464 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 HKR1P10072 659 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 FGF12P61328 243 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 ZNF385CQ66K41 422 aaPredicted RBP12.12□□□□□ -0.47
VTI1B-204ENST00000554659 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 IGHV4-34P06331 123 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 SCGB1A1P11684 91 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 MFAP2P55001 183 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 PAFAH1B2P68402 229 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 RUNX1Q01196 453 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 C1orf210Q8IVY1 113 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 OR2I1PQ8NGU4 316 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 TXNDC17Q9BRA2 123 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
VTI1B-204ENST00000554659 GREM1O60565 184 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 PLP1P60201 277 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 C3AR1Q16581 482 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
VTI1B-204ENST00000554659 COA4Q9NYJ1 87 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 CLN8Q9UBY8 286 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 TRAV39A0A0B4J263 110 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 IL11P20809 199 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 FCARP24071 287 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 WNT5AP41221 380 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 HPRT1P00492 218 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 LGALS7P47929 136 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 SLC35B1P78383 322 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 AESQ08117 197 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.11□□□□□ -0.47
VTI1B-204ENST00000554659 ASCL5Q7RTU5 278 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 MAFAQ8NHW3 353 aaPredicted RBP12.11□□□□□ -0.47
VTI1B-204ENST00000554659 ZNF502Q8TBZ5 544 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
VTI1B-204ENST00000554659 RAB1CQ92928 201 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 H2BFSP57053 126 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 ZNF501Q96CX3 271 aaPredicted RBP12.11□□□□□ -0.47
VTI1B-204ENST00000554659 IL19Q9UHD0 177 aa12.11□□□□□ -0.47
VTI1B-204ENST00000554659 MPDU1O75352 247 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 SNRNP40Q96DI7 357 aaKnown RBP12.1□□□□□ -0.47
VTI1B-204ENST00000554659 GMPPAQ96IJ6 420 aaPredicted RBP12.1□□□□□ -0.47
VTI1B-204ENST00000554659 MIA3Q5JRA6 1907 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 PSG4Q00888 419 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
VTI1B-204ENST00000554659 TRPM6Q9BX84 2022 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 LOC107984156A0A0G2JMH3 177 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 A0A0J9YW62 118 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 TRGC2P03986 189 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 ARL17AQ8IVW1 177 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 RAB1BQ9H0U4 201 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
VTI1B-204ENST00000554659 MDP1Q86V88 176 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 PCM1Q15154 2024 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 A0A1W2PP11 408 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 J3QR06 171 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 CD82P27701 267 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 C1orf174Q8IYL3 243 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 ARL6IP6Q8N6S5 226 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 P2RX4Q99571 388 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 NPVFQ9HCQ7 196 aa12.1□□□□□ -0.47
VTI1B-204ENST00000554659 H7C2G1 150 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 OR2A4O95047 310 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 Q8WTZ3 238 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
VTI1B-204ENST00000554659 COL25A1Q9BXS0 654 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms