RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 BCL3P20749 454 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 DTYMKP23919 212 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 BTCP35070 178 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 NPBWR2P48146 333 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 RAB13P51153 203 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 ARFRP1Q13795 201 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 MEF2DQ14814 521 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 SIGIRRQ6IA17 410 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 STEAP1BQ6NZ63 245 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 TRAPPC6BQ86SZ2 158 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 TMEM219Q86XT9 240 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 FAM58AQ8N1B3 248 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 Q8N2B8 174 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 OR2T6Q8NHC8 308 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 CHAC2Q8WUX2 184 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 SLAMF9Q96A28 289 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 PPP1R14BQ96C90 147 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 FAM234AQ9H0X4 552 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 HEXA-AS1Q9H8Q6 139 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 IFT46Q9NQC8 304 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 PLEKHJ1Q9NW61 149 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 OR14J1Q9UGF5 321 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 KCNK7Q9Y2U2 307 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 FUOMA2VDF0 154 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 A6NDX4 124 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 ZNF736B4DX44 427 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-215ENST00000554656 K7N7A8 449 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 GEMIN2O14893 280 aaKnown RBP8.51□□□□□ -1.05
SHMT2-215ENST00000554656 SSX5O60225 188 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 ZNF737O75373 536 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 RAB3DO95716 219 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 CD28P10747 220 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 GABRR1P24046 479 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 BCAP31P51572 246 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 MRPS15P82914 257 aaKnown RBP8.51□□□□□ -1.05
SHMT2-215ENST00000554656 SRSF7Q16629 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
SHMT2-215ENST00000554656 SPIN3Q5JUX0 258 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 C11orf88Q6PI97 169 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 Q6ZS46 218 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 HOGA1Q86XE5 327 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 OR4C16Q8NGL9 310 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 NUDCD2Q8WVJ2 157 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 EMG1Q92979 244 aaKnown RBP8.51□□□□□ -1.05
SHMT2-215ENST00000554656 NPFFR1Q9GZQ6 430 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 MMP28Q9H239 520 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 RIMS4Q9H426 269 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-215ENST00000554656 RAB18Q9NP72 206 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 SLC2A8Q9NY64 477 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 IL36RNQ9UBH0 155 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 TCF19Q9Y242 345 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 KIAA2026Q5HYC2 2103 aa8.51□□□□□ -1.05
SHMT2-215ENST00000554656 TMEM82A0PJX8 343 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 DISC1C4P0D8 188 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 PRAF2O60831 178 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 FBXO24O75426 580 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 OR7C1O76099 320 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-215ENST00000554656 DHFRP00374 187 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 TCRBP04435 133 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 TRAPPC2P0DI81 140 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 TRAPPC2BP0DI82 140 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 PRKACAP17612 351 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 LGALS4P56470 323 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 TAS2R46P59540 309 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 COL10A1Q03692 680 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 RBM39Q14498 530 aaKnown RBP8.5□□□□□ -1.05
SHMT2-215ENST00000554656 ZNF146Q15072 292 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 RBMS2Q15434 407 aaKnown RBP8.5□□□□□ -1.05
SHMT2-215ENST00000554656 NSUN5P1Q3KNT7 163 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 TMEM95Q3KNT9 176 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 PIGYQ3MUY2 71 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 FBLN7Q53RD9 439 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 RNASE10Q5GAN6 216 aaKnown RBP8.5□□□□□ -1.05
SHMT2-215ENST00000554656 VAX1Q5SQQ9 334 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 ZNF626Q68DY1 528 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 LIAT1Q6ZQX7 453 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 Q6ZS49 121 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 ARRDC1Q8N5I2 433 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 OR56B4Q8NH76 319 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 CMSS1Q9BQ75 279 aaKnown RBP8.5□□□□□ -1.05
SHMT2-215ENST00000554656 SLC25A21Q9BQT8 299 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-215ENST00000554656 GLS2Q9UI32 602 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 SCP2D1Q9UJQ7 156 aa8.5□□□□□ -1.05
SHMT2-215ENST00000554656 TRBV6-6A0A0A6YYG2 114 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 A0A1W2PPH5 198 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 INMT-MINDY4F8WBC2 141 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 NDUFB6O95139 128 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 RBP4P02753 201 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 MT-ND4P03905 459 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 CD3DP04234 171 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 ARG1P05089 322 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 ZNF728P0DKX0 622 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 IGHV1-8P0DP01 117 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 KCNJ3P48549 501 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 MECP2P51608 486 aaKnown RBP8.49□□□□□ -1.05
SHMT2-215ENST00000554656 RSBN1Q5VWQ0 802 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-215ENST00000554656 C6orf201Q7Z4U5 140 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 ASCC1Q8N9N2 400 aaKnown RBP8.49□□□□□ -1.05
SHMT2-215ENST00000554656 OR11H6Q8NGC7 330 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 PRRT1Q99946 306 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms