RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SRSF7Q16629 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 TUSC1Q2TAM9 212 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 LY6G6FQ5SQ64 297 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 AADACL3Q5VUY0 350 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 STUMQ69YW2 141 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 C11orf88Q6PI97 169 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF767PQ75MW2 155 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 UXS1Q8NBZ7 420 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 ADAD2Q8NCV1 583 aaKnown RBP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 OR5M8Q8NGP6 311 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 H1FXQ92522 213 aaKnown RBP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 SLAMF9Q96A28 289 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 FAM210AQ96ND0 272 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 PHB2Q99623 299 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 DNTTIP1Q9H147 329 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 OR51I2Q9H344 312 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 RCC2Q9P258 522 aaKnown RBP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 ONECUT1Q9UBC0 465 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 SOX21Q9Y651 276 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 IGKV1D-8A0A087WSZ0 117 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 A0A1B0GW55 424 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 J3QT63 122 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 RHBDL1O75783 438 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 SIX6O95475 246 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4L2P0CJ85 424 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4L3P0CJ86 424 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4L4P0CJ87 422 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4L5P0CJ88 424 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4L6P0CJ89 424 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4L7P0CJ90 424 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 GABRA2P47869 451 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 IL13RA2Q14627 380 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 PDCD1Q15116 288 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 LIN54Q6MZP7 749 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 HAGHLQ6PII5 290 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4L9Q6RFH8 374 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-214ENST00000554604 Q6ZS49 121 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 FGFRL1Q8N441 504 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 MAFIPQ8WZ33 124 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 LHX4Q969G2 390 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 TMEM230Q96A57 120 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 TBX15Q96SF7 602 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 HDHD3Q9BSH5 251 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-214ENST00000554604 C5orf66Q9H5L9 145 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF286AQ9HBT8 521 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 C12orf4Q9NQ89 552 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 NECAP2Q9NVZ3 263 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 MTCH1Q9NZJ7 389 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF581Q9P0T4 197 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 DUX4Q9UBX2 424 aa10.22□□□□□ -0.77
SHMT2-214ENST00000554604 CENPVL3A0A0U1RRI6 287 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 MDFIC2A0A1B0GVS7 189 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 OR5H14A6NHG9 310 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 DBX1A6NMT0 343 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 CLDN34H7C241 214 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-214ENST00000554604 FCN3O75636 299 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 OR7C1O76099 320 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-214ENST00000554604 SFT2D2O95562 160 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 GLAP06280 429 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.77
SHMT2-214ENST00000554604 MMP9P14780 707 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 AKR1C4P17516 323 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 NDUFB7P17568 137 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 FGL1Q08830 312 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 FOXL1Q12952 345 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 SLC9A3R2Q15599 337 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 DEFB112Q30KQ8 113 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 AWAT1Q58HT5 328 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 RUSC1-AS1Q66K80 236 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF660Q6AZW8 331 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-214ENST00000554604 DHRS11Q6UWP2 260 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF788Q6ZQV5 615 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 ANGPTL6Q8NI99 470 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-214ENST00000554604 SIRPDQ9H106 197 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 IFT22Q9H7X7 185 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 SPACA1Q9HBV2 294 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 SLC25A10Q9UBX3 287 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-214ENST00000554604 KPTNQ9Y664 436 aa10.21□□□□□ -0.77
SHMT2-214ENST00000554604 IGHV1-69DA0A0B4J2H0 117 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 RFPL4AA6NLU0 287 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 POM121CA8CG34 1229 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 RFPL4AL1F8VTS6 287 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 HOXA3O43365 443 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-214ENST00000554604 SYNGR1O43759 233 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 TFF1P04155 84 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 CTSDP07339 412 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-214ENST00000554604 ACAA1P09110 424 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-214ENST00000554604 OR5H8P0DN80 308 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 HKR1P10072 659 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 SELLP14151 372 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 NFYAP23511 347 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-214ENST00000554604 VAMP1P23763 118 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 SMIM21Q3B7S5 101 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 VMO1Q7Z5L0 202 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 PDZD9Q8IXQ8 264 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 WDR89Q96FK6 387 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms