RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 UTF1Q5T230 341 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 SLC35E4Q6ICL7 350 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 MOB1BQ7L9L4 216 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 UBE2J1Q9Y385 318 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 RBM7Q9Y580 266 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 ACACBO00763 2458 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 RLN2P04090 185 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 CLEC9AQ6UXN8 241 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 FAM90A1Q86YD7 464 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 SUCNR1Q9BXA5 334 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 TMEM222Q9H0R3 208 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 DNTTIP1Q9H147 329 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 H7C1Q1 480 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 TXNL1O43396 289 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 HEXAP06865 529 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 OMGP23515 440 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 IZUMO4Q1ZYL8 232 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 IL19Q9UHD0 177 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 UBQLN2Q9UHD9 624 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 HCFC1P51610 2035 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 RPS10-NUDT3A0A1W2PQS6 291 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 IFNL4K9M1U5 179 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 IFNA21P01568 189 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 GYPAP02724 150 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 IL2RGP31785 369 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 LUMP51884 338 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 EDDM3BP56851 147 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 LINC00205P59089 165 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 CYCSP99999 105 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 TLE1Q04724 770 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 NCMAPQ5T1S8 102 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 ACOT7LQ6ZUV0 252 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 LGI3Q8N145 548 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 C5orf30Q96GV9 206 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 PARD6GQ9BYG4 376 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 KCNIP1Q9NZI2 227 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
VIPAS39-206ENST00000553888 C17orf100A8MU93 164 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 IFNA7P01567 189 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 MBPP02686 304 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 CHRNB4P30926 498 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 CFHR2P36980 270 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 GATA4P43694 442 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 FAM74A1Q5RGS3 127 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 SELENOHQ8IZQ5 122 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 ZNF808Q8N4W9 903 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 INO80EQ8NBZ0 244 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 CA5BP1Q8WTZ4 195 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 ARL11Q969Q4 196 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 CITED4Q96RK1 184 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 OOEPA6NGQ2 149 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 GNG10P50151 68 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 PRSS54Q6PEW0 395 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 FAM216BQ8N7L0 139 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 GALMQ96C23 342 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 CCL13Q99616 98 aa10.62□□□□□ -0.71
VIPAS39-206ENST00000553888 A0A0G2JRQ6 117 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 RND3P61587 244 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 CMTM1Q8IZ96 169 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 LRTM2Q8N967 370 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 BVESQ8NE79 360 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 ZNF471Q9BX82 626 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 ZDHHC8Q9ULC8 765 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 OR2F2O95006 317 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 UQCRFS1P47985 274 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 OR2F1Q13607 317 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 BTNL3Q6UXE8 466 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 DRAM1Q8N682 238 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 RBMXL1Q96E39 390 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 CNTNAP3BQ96NU0 1288 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 CNTNAP3Q9BZ76 1288 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 OR2D2Q9H210 308 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 OR2S2Q9NQN1 319 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 CFAP46Q8IYW2 2715 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 A0A0D9SG52 128 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 KANTRA0A1W2PQU2 76 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 C15orf65H3BRN8 121 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 ADAM20O43506 726 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 BCL2L11O43521 198 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 TNFSF4P23510 183 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 F2RP25116 425 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 HABP2Q14520 560 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 ZNF345Q14585 488 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 FAM185AQ8N0U4 392 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 ABHD14BQ96IU4 210 aa10.61□□□□□ -0.71
VIPAS39-206ENST00000553888 TACC2O95359 2948 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 DOCK11Q5JSL3 2073 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 ODAMA1E959 279 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 C4BPBP20851 252 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 AANATQ16613 207 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 RNASE6Q93091 150 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 LEAP2Q969E1 77 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 BSCL2Q96G97 398 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms