RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	HMCN2	Q8NDA2	5059 aa		4.27	□□□□□ -1.73
ATXN3-223	ENST00000553686	MYCBP2	O75592	4640 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686		A0A087WUU8	490 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686		A0A0G2JLM5	398 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686		A0A1W2PN81	502 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	SMIM23	A6NLE4	172 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF729	A6NN14	1252 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF593	O00488	134 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	CXCR6	O00574	342 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	HSD17B6	O14756	317 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	ARPC3	O15145	178 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	ATP6V0E1	O15342	81 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	IDH3B	O43837	385 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	MITF	O75030	526 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR2C1	O95371	312 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	HAND1	O96004	215 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	NRAS	P01111	189 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	H2AFX	P16104	143 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	MPZ	P25189	248 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	CHRNA7	P36544	502 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	KIR2DS2	P43631	304 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	SLC1A6	P48664	564 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	CDC42	P60953	191 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	RIPPLY1	Q0D2K3	151 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	BNIP1	Q12981	228 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	GAGE2B	Q13066	116 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	DIAPH2-AS1	Q14236	149 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	DEFB135	Q30KP9	77 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	GAGE2E	Q4V326	116 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	PVRIG	Q6DKI7	326 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	GAGE2A	Q6NT46	116 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	YIPF7	Q8N8F6	280 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF565	Q8N9K5	539 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	PROKR2	Q8NFJ6	384 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR4K13	Q8NH42	304 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR52J3	Q8NH60	311 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	UBALD1	Q8TB05	177 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	EMG1	Q92979	244 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	CHST6	Q9GZX3	395 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	CST11	Q9H112	138 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	WFDC10A	Q9H1F0	79 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	DCAF13	Q9NV06	445 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	DNAJC27	Q9NZQ0	273 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF319	Q9P2F9	582 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	RHCG	Q9UBD6	479 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	GAGE2D	Q9UEU5	116 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	PSG11	Q9UQ72	335 aa		4.26	□□□□□ -1.73
ATXN3-223	ENST00000553686	KIR2DL5B	A0A0G2JN68	375 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	KIR2DL5B	A0A0G2JPC4	375 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686		A0A1B0GU03	582 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	C13orf42	A0A1B0GVH6	325 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	DHRS12	A0PJE2	317 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	TVP23A	A6NH52	213 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	SPAG7	O75391	227 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR2A4	O95047	310 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	IFNA10	P01566	189 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	IFNA21	P01568	189 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	IFNA17	P01571	189 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	HLA-DRB1	P01911	266 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	H2BFM	P0C1H6	154 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	SLC2A2	P11168	524 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	HIST1H1C	P16403	213 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	CTRB1	P17538	263 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	FMO3	P31513	532 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	TPPP2	P59282	170 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	STX1B	P61266	288 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	IL24	Q13007	206 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	MMD	Q15546	238 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	TEX30	Q5JUR7	227 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZC2HC1B	Q5TFG8	222 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	CTRB2	Q6GPI1	263 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686		Q6ZR54	194 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	OFCC1	Q8IZS5	231 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	KIR2DL5A	Q8N109	375 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	BATF2	Q8N1L9	274 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	RNF148	Q8N7C7	305 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR2T12	Q8NG77	320 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR9I1	Q8NGQ6	314 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR2T4	Q8NH00	348 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	KIR2DL5B	Q8NHK3	375 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	DYNLRB2	Q8TF09	96 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	CEP19	Q96LK0	163 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	C16orf45	Q96MC5	204 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	MBOAT4	Q96T53	435 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	RNF126	Q9BV68	326 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	PKIB	Q9C010	78 aa		4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	TECR	Q9NZ01	308 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-223	ENST00000553686	IGHV4-4	A0A075B6R2	117 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	IGHV7-81	A0A0B4J1V7	117 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	ODAM	A1E959	279 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	SH2D1B	O14796	132 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	BIRC5	O15392	142 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	IGHV3-7	P01780	117 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	TRGV3	P03979	118 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	H1F0	P07305	194 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	GABRB1	P18505	474 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	IL3RA	P26951	378 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	REG1B	P48304	166 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms