RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PGAM2P15259 253 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 RPS2P15880 293 aaKnown RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 SLC25A16P16260 332 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 RCC1P18754 421 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 FCGR2CP31995 323 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 CEACAM6P40199 344 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 GLIPR1P48060 266 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 LUMP51884 338 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 TAS2R31P59538 309 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 UBE2MP61081 183 aaKnown RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 HERV-K104P61576 105 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 RPL31P62899 125 aaKnown RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 EDDM3AQ14507 147 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 Q3ZCU0 254 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 SMUG1Q53HV7 270 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 ESCO2Q56NI9 601 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 LY6G6FQ5SQ64 297 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 FAHD2BQ6P2I3 314 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 PRSS57Q6UWY2 283 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 LYPD2Q6UXB3 125 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 IDO2Q6ZQW0 420 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 NRARPQ7Z6K4 114 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 ZBTB34Q8NCN2 500 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 OR51S1Q8NGJ8 323 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 OR52M1Q8NGK5 317 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 IGFBPL1Q8WX77 278 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 H1FXQ92522 213 aaKnown RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 CREB3L1Q96BA8 519 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 FAHD2AQ96GK7 314 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF486Q96H40 463 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 COQ2Q96H96 371 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 AKR1E2Q96JD6 320 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 SLC6A7Q99884 636 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF2Q9BSG1 426 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 HDHD3Q9BSH5 251 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 MARVELD1Q9BSK0 173 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 CABLES2Q9BTV7 478 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 TINAGL1Q9GZM7 467 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF69Q9UC07 566 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 MAST4O15021 2626 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 LAMA5O15230 3695 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 BSNQ9UPA5 3926 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 ASPMQ8IZT6 3477 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 FRYQ5TBA9 3013 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 LOC105371242A0A075B767 164 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 TRBV6-7A0A0A0MS04 114 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 PPIAL4CA0A0B4J2A2 164 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 KBTBD11-OT1A0A1B0GTJ5 212 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 CEACAM18A8MTB9 384 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 NPIPB11E5RHQ5 1161 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 F2RL2O00254 374 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 SDCBPO00560 298 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-202ENST00000553619 ITGB1BP1O14713 200 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 YPEL1O60688 119 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 B3GALNT1O75752 331 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 IGHV4-39P01824 125 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 HBZP02008 142 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 RBP4P02753 201 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 RLN1P04808 185 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 IL5P05113 134 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF735P0CB33 412 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF728P0DKX0 622 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 PPIAL4GP0DN37 164 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 CGB3P0DN86 165 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 CGB7P0DN87 165 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 ANXA3P12429 323 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 M6PRP20645 277 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 RAB7AP51149 207 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 CCR6P51684 374 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 PRRX1P54821 245 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 RAB25P57735 213 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 HMGN3Q15651 99 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 MSMO1Q15800 293 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 DEFB113Q30KQ7 82 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 ABCA11PQ4W5N1 156 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 AVPI1Q5T686 147 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 METTL11BQ5VVY1 283 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 WDR25Q64LD2 544 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-202ENST00000553619 Q6ZNX1 250 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 C1orf122Q6ZSJ8 110 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 TGIF2LYQ8IUE0 185 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 CMTM1Q8IZ96 169 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 SLC38A6Q8IZM9 456 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 FAM185AQ8N0U4 392 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 PRR18Q8N4B5 295 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 FAM216BQ8N7L0 139 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 CCDC71LQ8N9Z2 235 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 OR10V1Q8NGI7 309 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 OR13A1Q8NGR1 328 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 C8orf46Q8TAG6 207 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 MRGPRDQ8TDS7 321 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 IL1F10Q8WWZ1 152 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 MAFIPQ8WZ33 124 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 DYRK2Q92630 601 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF714Q96N38 554 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 YPEL2Q96QA6 119 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 AIFM2Q9BRQ8 373 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 DCTN5Q9BTE1 182 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 TOLLIPQ9H0E2 274 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 OR2S2Q9NQN1 319 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms