RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 GFOD1Q9NXC2 390 aa7.97□□□□□ -1.13
TMEM260-204ENST00000553335 TEP1Q99973 2627 aaKnown RBP7.96□□□□□ -1.14
TMEM260-204ENST00000553335 A0A087X0M5 115 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 A0A1B0GX30 115 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 DISC1C4P0D8 188 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 LANCL1O43813 399 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 MMP23AO75900 390 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 RAB3DO95716 219 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 CD3DP04234 171 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
TMEM260-204ENST00000553335 HRH1P35367 487 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 PRRX1P54821 245 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 LOXL3P58215 753 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 TSPAN5P62079 268 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 DYRK1AQ13627 763 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 MEF2DQ14814 521 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 HERPUD1Q15011 391 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 MORN2Q502X0 79 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 LY6G6FQ5SQ64 297 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 VAX1Q5SQQ9 334 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 CDPF1Q6NVV7 123 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 STEAP1BQ6NZ63 245 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 OVCH2Q7RTZ1 564 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 OR10V1Q8NGI7 309 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 OR9G1Q8NH87 305 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 WFDC12Q8WWY7 111 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 TNFRSF14Q92956 283 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 LHX4Q969G2 390 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 TRIM63Q969Q1 353 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 UPRTQ96BW1 309 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 TBX15Q96SF7 602 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 SDHCQ99643 169 aaPredicted RBP7.96□□□□□ -1.14
TMEM260-204ENST00000553335 CLEC7AQ9BXN2 247 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 TOLLIPQ9H0E2 274 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 YAE1D1Q9NRH1 226 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 EHFQ9NZC4 300 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 ZNF69Q9UC07 566 aa7.96□□□□□ -1.14
TMEM260-204ENST00000553335 IGHV2-26A0A0B4J1V2 119 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 IGKV1-6A0A0C4DH72 117 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 ANKRD34BA5PLL1 514 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 FAM172BPA6NC97 362 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 NAP1L6A6NFF2 107 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 CENPXA8MT69 81 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 A8MV72 311 aaPredicted RBP7.95□□□□□ -1.14
TMEM260-204ENST00000553335 J3QRK9 145 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 M0QYG6 137 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 ITGB1BP1O14713 200 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 CD74P04233 296 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 OR5H8P0DN80 308 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 CD34P28906 385 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 PPP1CCP36873 323 aaKnown RBP7.95□□□□□ -1.14
TMEM260-204ENST00000553335 RFX2P48378 723 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 UBE2E1P51965 193 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 GPR157Q5UAW9 335 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 ABHD12Q8N2K0 398 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 PNKDQ8N490 385 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 ARRDC1Q8N5I2 433 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 C8orf31Q8N9H6 132 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 OR2AK2Q8NG84 335 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 OR6F1Q8NGZ6 308 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 ZNF596Q8TC21 504 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 FAM216AQ8WUB2 273 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 GIMAP1Q8WWP7 306 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 C7orf50Q9BRJ6 194 aaKnown RBP7.95□□□□□ -1.14
TMEM260-204ENST00000553335 GHITMQ9H3K2 345 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 ABCB10Q9NRK6 738 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 RDH8Q9NYR8 311 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 OR1A1Q9P1Q5 309 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 PSG11Q9UQ72 335 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 RBM7Q9Y580 266 aaKnown RBP7.95□□□□□ -1.14
TMEM260-204ENST00000553335 MED13LQ71F56 2210 aa7.95□□□□□ -1.14
TMEM260-204ENST00000553335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.95□□□□□ -1.143e-6■■■■□ 24
TMEM260-204ENST00000553335 ITPR3Q14573 2671 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 TRAV40A0A0B4J280 105 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 RNASEK-C17orf49H0YIS7 233 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 J3QR06 171 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 UPK1BO75841 260 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 LY6G6DO95868 133 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 AMY2AP04746 511 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 ARG1P05089 322 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 HNF1AP20823 631 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 NFYAP23511 347 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-204ENST00000553335 COX7A1P24310 79 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 IL3RAP26951 378 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 FCGR2CP31995 323 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 GNG10P50151 68 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 RAB7AP51149 207 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 LUMP51884 338 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-204ENST00000553335 LGALS4P56470 323 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 BPIFB3P59826 476 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 HERV-K104P61576 105 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 KRTAP1-1Q07627 177 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 KLF9Q13886 244 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-204ENST00000553335 GNMTQ14749 295 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 ANKRD39Q53RE8 183 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 C16orf87Q6PH81 154 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 DHRS11Q6UWP2 260 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 CLEC9AQ6UXN8 241 aa7.94□□□□□ -1.14
TMEM260-204ENST00000553335 H1FOOQ8IZA3 346 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-204ENST00000553335 LINC00311Q8N616 119 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms