RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 HOXB5P09067 269 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 DAOP14920 347 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 F2RP25116 425 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 LOXL3P58215 753 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 MORN2Q502X0 79 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 C9orf62Q8N4C0 152 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 TIMD4Q96H15 378 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 SEC22AQ96IW7 307 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 C18orf12Q96KH6 178 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 C2orf50Q96LR7 162 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 TMEM56Q96MV1 263 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 OR2D2Q9H210 308 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 GAL3ST2Q9H3Q3 398 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 C19orf12Q9NSK7 152 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 IDI2-AS1Q9NZ38 188 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 COMMD9Q9P000 198 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 TMEM56-RWDD3S4R434 201 aa10.5□□□□□ -0.73
CACNB3-223ENST00000552480 ANKHD1Q8IWZ3 2542 aaKnown RBP10.49□□□□□ -0.73
CACNB3-223ENST00000552480 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 DUXBA0A1W2PPF3 345 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 RNF212BA8MTL3 300 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 ITGB1BP1O14713 200 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 TNFSF12O43508 249 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 SNAPC5O75971 98 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 UCP1P25874 307 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 RPL31P62899 125 aaKnown RBP10.49□□□□□ -0.73
CACNB3-223ENST00000552480 LTC4SQ16873 150 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 TMEM155Q4W5P6 130 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 GGNBP1Q5YKI7 109 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 LAMTOR1Q6IAA8 161 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 FAM53AQ6NSI3 398 aaPredicted RBP10.49□□□□□ -0.73
CACNB3-223ENST00000552480 DRAM1Q8N682 238 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 OR10A7Q8NGE5 316 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 OR52M1Q8NGK5 317 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 GRPEL2Q8TAA5 225 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 RAB1CQ92928 201 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 IL22RA2Q969J5 263 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 CHODLQ9H9P2 273 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 GFOD1Q9NXC2 390 aa10.49□□□□□ -0.73
CACNB3-223ENST00000552480 TRBV23-1A0A0A0MS06 115 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 PIGBOS1A0A0B4J2F0 54 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 HMSDA8MTL9 139 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
CACNB3-223ENST00000552480 CDKN1AP38936 164 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 EIF4EBP1Q13541 118 aaPredicted RBP10.48□□□□□ -0.73
CACNB3-223ENST00000552480 ZNF273Q14593 569 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 AVPI1Q5T686 147 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 SELENOHQ8IZQ5 122 aaKnown RBP10.48□□□□□ -0.73
CACNB3-223ENST00000552480 LHFPL5Q8TAF8 219 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 H1FXQ92522 213 aaKnown RBP10.48□□□□□ -0.73
CACNB3-223ENST00000552480 OR10C1Q96KK4 312 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 GPHA2Q96T91 129 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 LIN7CQ9NUP9 197 aaKnown RBP10.48□□□□□ -0.73
CACNB3-223ENST00000552480 MIOXQ9UGB7 285 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 RNF150Q9ULK6 438 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 PSG11Q9UQ72 335 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 TMED3Q9Y3Q3 217 aa10.48□□□□□ -0.73
CACNB3-223ENST00000552480 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 FXYD6-FXYD2A0A087WZ82 144 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 MPTX1A8MV57 137 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 GPR37O15354 613 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 PPIHO43447 177 aaKnown RBP10.47□□□□□ -0.73
CACNB3-223ENST00000552480 LY6HO94772 140 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 CDS2O95674 445 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 SLC25A4P12235 298 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 OMGP23515 440 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 RAB7AP51149 207 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 EFNA4P52798 201 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 TMEM33P57088 247 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.73
CACNB3-223ENST00000552480 IAH1Q2TAA2 248 aaPredicted RBP10.47□□□□□ -0.73
CACNB3-223ENST00000552480 PRAMEF5Q5TYX0 476 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 TMEM200BQ69YZ2 307 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 LYZL2Q7Z4W2 148 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 OR51H1Q8NH63 302 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 PPP1R1CQ8WVI7 109 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 C5orf30Q96GV9 206 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 ZNF714Q96N38 554 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 AGMATQ9BSE5 352 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 PLEKHF2Q9H8W4 249 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 PLSCR3Q9NRY6 295 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 RPUSD1Q9UJJ7 312 aaKnown RBP10.47□□□□□ -0.73
CACNB3-223ENST00000552480 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 HSPB11Q9Y547 144 aa10.47□□□□□ -0.73
CACNB3-223ENST00000552480 OVOL3O00110 214 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 SERPINE2P07093 398 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 PSMB6P28072 239 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 GPR12P47775 334 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 CATR1Q13166 79 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 IL15RAQ13261 267 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 ESCO2Q56NI9 601 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 C11orf87Q6NUJ2 197 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 TMEM65Q6PI78 240 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 HEPN1Q6WQI6 88 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 ZNF66Q6ZN08 573 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 ZNF841Q6ZN19 808 aa10.46□□□□□ -0.73
CACNB3-223ENST00000552480 TCTEX1D1Q8N7M0 179 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms