RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 ZSCAN5DPP0CG00 497 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 CHTF8P0CG12 524 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 MPC1LP0DKB6 136 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 POLR2IP36954 125 aaKnown RBP4.71□□□□□ -1.66
VPS29-210ENST00000552130 HSPA9P38646 679 aaKnown RBP4.71□□□□□ -1.66
VPS29-210ENST00000552130 DEFA1P59665 94 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 GRB2P62993 217 aaKnown RBP4.71□□□□□ -1.66
VPS29-210ENST00000552130 EGFEM1PQ0D2K5 195 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 OR8B8Q15620 311 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 GUCA2BQ16661 112 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 UBE2NLQ5JXB2 153 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 CLLU1OSQ5K130 101 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 ADAMTSL4-AS1Q5T5F5 129 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 ARL9Q6T311 187 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 SBSNQ6UWP8 590 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 ACP7Q6ZNF0 438 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 TMUB2Q71RG4 321 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 FAM19A3Q7Z5A8 133 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 PRNTQ86SH4 94 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 THEM6Q8WUY1 208 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 KLK6Q92876 244 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 GPR146Q96CH1 333 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 SLC45A3Q96JT2 553 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 LYSMD1Q96S90 227 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 C1QTNF4Q9BXJ3 329 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 ZNF702PQ9H963 129 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 ZNF331Q9NQX6 463 aaPredicted RBP4.71□□□□□ -1.66
VPS29-210ENST00000552130 PARP11Q9NR21 331 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 COA4Q9NYJ1 87 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 LINC00527Q9UJ94 153 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 PYGO1Q9Y3Y4 419 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 FLVCR1Q9Y5Y0 555 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 RIMS1Q86UR5 1692 aaKnown RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 BAZ2AQ9UIF9 1905 aaKnown RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 MYH2Q9UKX2 1941 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 PRDM2Q13029 1718 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 TRAV8-1A0A0A6YYK1 113 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 OR5H14A6NHG9 310 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 EPOPA6NHQ4 379 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 CD300LBA8K4G0 201 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 J3KT08 172 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 M0R1X1 148 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 AIPO00170 330 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 ISLRO14498 428 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 GYG2O15488 501 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 TCF21O43680 179 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 ANGPTL7O43827 346 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 HLA-DRB1P01911 266 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 DBIP07108 87 aaKnown RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 UBBP0CG47 229 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 OR12D1P0DN82 309 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 MDH2P40926 338 aaKnown RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 RPS20P60866 119 aaKnown RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 RPL23P62829 140 aaKnown RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 ELF3P78545 371 aaPredicted RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 BTN1A1Q13410 526 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 ABCA11PQ4W5N1 156 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 PRR30Q53SZ7 412 aaPredicted RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 TCEAL5Q5H9L2 206 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 C9orf57Q5W0N0 161 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 Q6ZSR6 202 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 KLHDC8BQ8IXV7 354 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 LY6G5BQ8NDX9 201 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 OR13C4Q8NGS5 318 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 GPR119Q8TDV5 335 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 TWIST2Q8WVJ9 160 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 OR5P3Q8WZ94 311 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 NEUROG1Q92886 237 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 RPUSD4Q96CM3 377 aaKnown RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 CHCHD5Q9BSY4 110 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 DOHHQ9BU89 302 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 CHST6Q9GZX3 395 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 Q9H3A6 140 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 PCYT1BQ9Y5K3 369 aaPredicted RBP4.7□□□□□ -1.66
VPS29-210ENST00000552130 MYH10P35580 1976 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 PLCH2O75038 1416 aa4.7□□□□□ -1.66
VPS29-210ENST00000552130 RTL1A6NKG5 1358 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 DNMT1P26358 1616 aaKnown RBP4.69□□□□□ -1.66
VPS29-210ENST00000552130 A0A1B0GX51 115 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 F5H5P2 479 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 PEX7O00628 323 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 ORM2P19652 201 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 GATA2P23769 480 aaPredicted RBP4.69□□□□□ -1.66
VPS29-210ENST00000552130 DSCR9P59020 149 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 C12orf74Q32Q52 190 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 IBA57Q5T440 356 aaKnown RBP4.69□□□□□ -1.66
VPS29-210ENST00000552130 GLYATQ6IB77 296 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 ZNF615Q8N8J6 731 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 OR52P1PQ8NH57 321 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 OR51H1Q8NH63 302 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 CANT1Q8WVQ1 401 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 PLEKHB2Q96CS7 222 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 MALSU1Q96EH3 234 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 GPR82Q96P67 336 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 ZNF649Q9BS31 505 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 SAMD10Q9BYL1 202 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 CALML5Q9NZT1 146 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 MED11Q9P086 117 aa4.69□□□□□ -1.66
VPS29-210ENST00000552130 KLK13Q9UKR3 277 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms