RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 DPRXA6NFQ7 191 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 OR2T8A6NH00 312 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 OTOL1A6NHN0 477 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SHISA7A6NL88 538 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 CEBPZOSA8MTT3 80 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 F2Z2F3 143 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 M0R296 226 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC33A1O00400 549 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 TRAF3IP2O43734 574 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF737O75373 536 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 NUDT14O95848 222 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SCGB1D2O95969 90 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 CA2P00918 260 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF728P0DKX0 622 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 CRISP2P16562 243 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF17P17021 662 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 EN2P19622 333 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 TUBG1P23258 451 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 CD1BP29016 333 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 NTSR1P30989 418 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 MC5RP33032 325 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 RPS27P42677 84 aaKnown RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 NKX2-1P43699 371 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 GABRA2P47869 451 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC6A8P48029 635 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 LGALS4P56470 323 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 PIGPP57054 158 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SELENOVP59797 346 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 PPP1CBP62140 327 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 BTN3A2P78410 334 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 PSG4Q00888 419 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 VGLL4Q14135 290 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ACKR1Q16570 336 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 PRICKLE4Q2TBC4 344 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 HLA-DRB5Q30154 266 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SPIN3Q5JUX0 258 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 FAM78BQ5VT40 261 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC35E4Q6ICL7 350 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM108Q6UXF1 575 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 WDR82Q6UXN9 313 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 FOXI2Q6ZQN5 318 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 Q6ZS49 121 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 Q6ZSR6 202 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 COX15Q7KZN9 410 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 PARS2Q7L3T8 475 aaKnown RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ABHD12BQ7Z5M8 362 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 MARCH3Q86UD3 253 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 HAPLN4Q86UW8 402 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 LRP11Q86VZ4 500 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 LINC00346Q8IVM7 164 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SELENOHQ8IZQ5 122 aaKnown RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF525Q8N782 197 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 C5orf17Q8NAS9 161 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 NECAP1Q8NC96 275 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ST6GALNAC3Q8NDV1 305 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 OR8B3Q8NGG8 313 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SGMS2Q8NHU3 365 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 MRPL30Q8TCC3 161 aaKnown RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 RTN4IP1Q8WWV3 396 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 DAZLQ92904 295 aaKnown RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 FGF14Q92915 247 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 NEIL1Q96FI4 390 aaPredicted RBP4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 GUCD1Q96NT3 240 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 OR8B2Q96RD0 313 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SPIN2AQ99865 258 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 SPIN2BQ9BPZ2 258 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM59Q9BXS4 323 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 GNB1LQ9BYB4 327 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM222Q9H0R3 208 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 OR10A2Q9H208 303 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 VSIRQ9H7M9 311 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 MOB1AQ9H8S9 216 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ST20Q9HBF5 79 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 LYRM4Q9HD34 91 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 Q9UFV3 132 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ANXA10Q9UJ72 324 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 RARRES3Q9UL19 164 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF835Q9Y2P0 537 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 ATG2AQ2TAZ0 1938 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 TICRRQ7Z2Z1 1910 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 HEATR5AQ86XA9 2040 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 IGKV1-9A0A0C4DH69 117 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ODAMA1E959 279 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 PRSS38A1L453 326 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 NPIPB13A6NJU9 1138 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ZFP92A6NM28 416 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 GRXCR1A8MXD5 290 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ALG1L2C9J202 215 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 NPIPB4C9JG80 1138 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 H3BSH0 61 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 H7C1C5 153 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 DEGS1O15121 323 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 CRXO43186 299 aaPredicted RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF324O75467 553 aaPredicted RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 WISP2O76076 250 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 AGFG2O95081 481 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 S1PR2O95136 353 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 IGKV1D-33P01593 117 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 IGKV1-33P01594 117 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 CELA3BP08861 270 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms