RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 PLSCR3Q9NRY6 295 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 INTS9Q9NV88 658 aaKnown RBP2.72□□□□□ -1.97
LIMA1-206ENST00000550611 TAS2R3Q9NYW6 316 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 LINC00527Q9UJ94 153 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 ENPP5Q9UJA9 477 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 SAMD4AQ9UPU9 718 aaKnown RBP2.72□□□□□ -1.97
LIMA1-206ENST00000550611 BAIAP2Q9UQB8 552 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 POLDIP2Q9Y2S7 368 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 MOB4Q9Y3A3 225 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 HSPE1-MOB4S4R3N1 261 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 V9GYS6 101 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 IGLV5-37A0A075B6J1 123 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 IGKV1-27A0A075B6S5 117 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 TMEM269A0A1B0GVZ9 245 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 A0A1W2PPI3 338 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 MAGEA13PA6NCF6 341 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 FAM183AA6NL82 134 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 DHRS7CA6NNS2 312 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 SERPINE3A8MV23 424 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 XRCC3O43542 346 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 BUB3O43684 328 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 SELENOFO60613 162 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 DHRS3O75911 302 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 HAND1O96004 215 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 IGHG4P01861 327 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 TTRP02766 147 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 S100A9P06702 114 aaKnown RBP2.71□□□□□ -1.98
LIMA1-206ENST00000550611 COX4I1P13073 169 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 MYOD1P15172 320 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 SLC2A5P22732 501 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 CDK2P24941 298 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 PSMB8P28062 276 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 CEACAM3P40198 252 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 MNDAP41218 407 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 OR3A1P47881 315 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ARHGDIBP52566 201 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 CRIP2P52943 208 aaPredicted RBP2.71□□□□□ -1.98
LIMA1-206ENST00000550611 HCCSP53701 268 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 PRRX1P54821 245 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 RAB25P57735 213 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 SLC35B1P78383 322 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 GPR50Q13585 617 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 DIAPH2-AS1Q14236 149 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF146Q15072 292 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 FCN2Q15485 313 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 GRK1Q15835 563 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 C17orf58Q2M2W7 97 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 KRTAP13-3Q3SY46 172 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 Q3ZCU0 254 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF684Q5T5D7 378 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 PRAMEF5Q5TYX0 476 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 AADACL4Q5VUY2 407 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ASRGL1Q7L266 308 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 SLC35E3Q7Z769 313 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF554Q86TJ5 538 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF429Q86V71 674 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 BATF2Q8N1L9 274 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 Q8N6K4 173 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ASCC1Q8N9N2 400 aaKnown RBP2.71□□□□□ -1.98
LIMA1-206ENST00000550611 Q8N9W7 124 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 OR2T33Q8NG76 320 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 OR9Q2Q8NGE9 314 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 OR6K6Q8NGW6 343 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 OR52I2Q8NH67 350 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ENKURQ8TC29 256 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 C4orf3Q8WVX3 66 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 KCTD14Q9BQ13 255 aaPredicted RBP2.71□□□□□ -1.98
LIMA1-206ENST00000550611 DGCR6LQ9BY27 220 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 YIPF3Q9GZM5 350 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 PBOV1Q9GZY1 135 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ABCG5Q9H222 651 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 PPIL3Q9H2H8 161 aaKnown RBP2.71□□□□□ -1.98
LIMA1-206ENST00000550611 EFCAB1Q9HAE3 211 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 GPR84Q9NQS5 396 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 GPR173Q9NS66 373 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 ARMC1Q9NVT9 282 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 NUFIP1Q9UHK0 495 aaKnown RBP2.71□□□□□ -1.98
LIMA1-206ENST00000550611 PIGLQ9Y2B2 252 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 OR2W1Q9Y3N9 320 aa2.71□□□□□ -1.98
LIMA1-206ENST00000550611 TRAV6A0A075B6T7 132 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 TRGV10A0A0A0MS01 117 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 TRBV2A0A0J9YWF9 115 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 KBTBD11-OT1A0A1B0GTJ5 212 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 A6NIN4 97 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SNTNA6NMZ2 147 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 RIIAD1A6NNX1 92 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 TNFRSF11BO00300 401 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 ENTPD6O75354 484 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 GMNNO75496 209 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 CRTAPO75718 401 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SOX14O95416 240 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 IFNGP01579 166 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 IGF1P05019 195 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 FABP3P05413 133 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 CSN2P05814 226 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 HSD17B1P14061 328 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 GP9P14770 177 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 H2AFXP16104 143 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SPNP16150 400 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms