RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 PLXNB1O43157 2135 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 IGLV2-18A0A075B6J9 118 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 A0A096LNT2 108 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 IGHV1-45A0A0A0MS14 117 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 A0A1B0GX78 115 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 A0A1W2PPV4 95 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 A0A1W2PRF3 423 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 A0A1W2PRM7 423 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 CENPXA8MT69 81 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 DEFB108AA8MXU0 73 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 EEF1E1-BLOC1S5C9J1V9 151 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 PSMD11O00231 422 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 LIN7AO14910 233 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-205ENST00000550592 EEF1E1O43324 174 aaKnown RBP2.74□□□□□ -1.97
LIMA1-205ENST00000550592 KDELR3O43731 214 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 TGM6O95932 706 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 CPN2P22792 545 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 OPRM1P35372 400 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 APLNRP35414 380 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 PRLHRP49683 370 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 ETV1P50549 477 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 DSTNP60981 165 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 SNRPFP62306 86 aaKnown RBP2.74□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF616Q08AN1 781 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 NAB1Q13506 487 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 MAPRE2Q15555 327 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 LY6EQ16553 131 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 FAM222AQ5U5X8 452 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 OPN5Q6U736 354 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 UNQ9165/PRO28630Q6UXU0 137 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF561Q8N587 486 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 DRAM1Q8N682 238 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF645Q8N7E2 425 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 OR8K1Q8NGG5 319 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 OR10Z1Q8NGY1 313 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 OR13G1Q8NGZ3 307 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 TCP10LQ8TDR4 215 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 BAALCQ8WXS3 180 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 COX14Q96I36 57 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 ATP6V1G3Q96LB4 118 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 KCNS3Q9BQ31 491 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 CHCHD7Q9BUK0 85 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 SFXN3Q9BWM7 321 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 OSBPL11Q9BXB4 747 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 ARMC7Q9H6L4 198 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 VCX3AQ9NNX9 186 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 RBFOX1Q9NWB1 397 aaKnown RBP2.74□□□□□ -1.97
LIMA1-205ENST00000550592 DDIT4Q9NX09 232 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 C3orf18Q9UK00 162 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 KLF13Q9Y2Y9 288 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-205ENST00000550592 CBY1Q9Y3M2 126 aa2.74□□□□□ -1.97
LIMA1-205ENST00000550592 BZW2Q9Y6E2 419 aaKnown RBP2.74□□□□□ -1.97
LIMA1-205ENST00000550592 A0A0J9YYE9 177 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 A0A1W2PQ67 120 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 SLC5A10A0PJK1 596 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 RPL36A-HNRNPH2H7BZ11 118 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 MANBAO00462 879 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 PSPHP1O15172 72 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 BIRC5O15392 142 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 NPPAP01160 153 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 TRBC1P01850 177 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 HLA-DRAP01903 254 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 MBP02144 154 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 IL4P05112 153 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF7P17097 686 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-205ENST00000550592 PRKACBP22694 351 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 CRYGSP22914 178 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 CCNG1P51959 295 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 EMP2P54851 167 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 B2MP61769 119 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 IFFO1Q0D2I5 559 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 STK38Q15208 465 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 PRSS8Q16651 343 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 TMEM236Q5W0B7 351 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 STEAP4Q687X5 459 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 SPATA24Q86W54 205 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 SPANXA2-OT1Q8N9U9 137 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 WDR31Q8NA23 367 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 TMEM104Q8NE00 496 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 OR5T1Q8NG75 326 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 OR51L1Q8NGJ5 315 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 OR52K1Q8NGK4 314 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 OR1L1Q8NH94 360 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 ENKURQ8TC29 256 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 DCAKDQ8WVC6 231 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 RTN4IP1Q8WWV3 396 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-205ENST00000550592 ARL5BQ96KC2 179 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 SULT4A1Q9BR01 284 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 METTL17Q9H7H0 456 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-205ENST00000550592 KIR3DX1Q9H7L2 352 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 C8orf4Q9NR00 106 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 CISHQ9NSE2 258 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 C21orf62Q9NYP8 219 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 SIGLEC9Q9Y336 463 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 PCYT1BQ9Y5K3 369 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-205ENST00000550592 COL7A1Q02388 2944 aa2.73□□□□□ -1.97
LIMA1-205ENST00000550592 DOCK4Q8N1I0 1966 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms