RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PYHIN1Q6K0P9 492 aa10.55□□□□□ -0.72
RAB5C-206ENST00000550406 ODF3L1Q8IXM7 274 aa10.55□□□□□ -0.72
RAB5C-206ENST00000550406 C11orf54Q9H0W9 315 aaPredicted RBP10.55□□□□□ -0.72
RAB5C-206ENST00000550406 MEGF9Q9H1U4 602 aa10.55□□□□□ -0.72
RAB5C-206ENST00000550406 KLK11Q9UBX7 282 aa10.55□□□□□ -0.72
RAB5C-206ENST00000550406 MTFP1Q9UDX5 166 aa10.55□□□□□ -0.72
RAB5C-206ENST00000550406 TBL2Q9Y4P3 447 aaKnown RBP10.55□□□□□ -0.72
RAB5C-206ENST00000550406 ITGB1BP1O14713 200 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 LANCL1O43813 399 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 DIRAS3O95661 229 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 ZBTB25P24278 435 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 HTR1DP28221 377 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 ETV6P41212 452 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 LGALS4P56470 323 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 MINOS1Q5TGZ0 78 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 FAM131AQ6UXB0 335 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 Q6YL49 198 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
RAB5C-206ENST00000550406 ST6GALNAC6Q969X2 333 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 MALSU1Q96EH3 234 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 AGMATQ9BSE5 352 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 IFT46Q9NQC8 304 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 RDH8Q9NYR8 311 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 RABL2AQ9UBK7 228 aaPredicted RBP10.54□□□□□ -0.72
RAB5C-206ENST00000550406 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 MINOS1-NBL1R4GNA1 71 aa10.54□□□□□ -0.72
RAB5C-206ENST00000550406 GABARAPH6UMI1 98 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 ST8SIA5O15466 376 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 HSPA12AO43301 675 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 GSTZ1O43708 216 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-206ENST00000550406 NFYAP23511 347 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-206ENST00000550406 SSX2Q16385 188 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 TPTE2P1Q5T6R2 138 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 OR5AP2Q8NGF4 316 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 OR10J5Q8NHC4 309 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 PIFOQ8TCI5 191 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 C15orf40Q8WUR7 153 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 SMIM4Q8WVI0 70 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 FCAMRQ8WWV6 532 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 ABHD14AQ9BUJ0 271 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 IFI27L2Q9H2X8 130 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 ESM1Q9NQ30 184 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 PTTG2Q9NZH5 202 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 RBMX2Q9Y388 322 aaKnown RBP10.53□□□□□ -0.72
RAB5C-206ENST00000550406 HILPDAQ9Y5L2 63 aa10.53□□□□□ -0.72
RAB5C-206ENST00000550406 LEUTXA8MZ59 168 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 PROP1O75360 226 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 RBBP9O75884 186 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 TUSC2O75896 110 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 RGS11O94810 467 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 PMP2P02689 132 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 CTXN2P0C2S0 81 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 PTBP1P26599 531 aaKnown RBP eCLIP10.52□□□□□ -0.736e-22■■■■■ 138.4
RAB5C-206ENST00000550406 HLA-DMAP28067 261 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 RCVRNP35243 200 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 OR3A3P47888 321 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 RFX2P48378 723 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 ZNF137PP52743 207 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 FBLN7Q53RD9 439 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 ZNF660Q6AZW8 331 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-206ENST00000550406 PRIMA1Q86XR5 153 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 MFSD4AQ8N468 514 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 ZDHHC22Q8N966 263 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 OR10X1Q8NGY0 326 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 ABHD14BQ96IU4 210 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 SDHCQ99643 169 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-206ENST00000550406 ZNF251Q9BRH9 671 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 OCEL1Q9H607 264 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 RNF150Q9ULK6 438 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 FAM96BQ9Y3D0 163 aa10.52□□□□□ -0.73
RAB5C-206ENST00000550406 IGKV1D-13A0A0B4J2D9 117 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 VENTXO95231 258 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 FBP1P09467 338 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 IGKV1-13P0DP09 117 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 IER3P46695 156 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 RAB13P51153 203 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 ARPC4P59998 168 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 MRPS10P82664 201 aaKnown RBP10.51□□□□□ -0.73
RAB5C-206ENST00000550406 SRSF2Q01130 221 aaKnown RBP10.51□□□□□ -0.73
RAB5C-206ENST00000550406 CDK10Q15131 360 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 PLA1AQ53H76 456 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 OVCH2Q7RTZ1 564 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 LYG1Q8N1E2 194 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 OR2AK2Q8NG84 335 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 RBMXL1Q96E39 390 aaKnown RBP10.51□□□□□ -0.73
RAB5C-206ENST00000550406 C5orf30Q96GV9 206 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 GINS4Q9BRT9 223 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 SRRQ9GZT4 340 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 AKIP1Q9NQ31 210 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 NECAP2Q9NVZ3 263 aa10.51□□□□□ -0.73
RAB5C-206ENST00000550406 AMMECR1Q9Y4X0 333 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-206ENST00000550406 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
RAB5C-206ENST00000550406 SAA2-SAA4A0A096LPE2 208 aa10.5□□□□□ -0.73
RAB5C-206ENST00000550406 A0A1W2PPI3 338 aa10.5□□□□□ -0.73
RAB5C-206ENST00000550406 VGLL3A8MV65 326 aa10.5□□□□□ -0.73
RAB5C-206ENST00000550406 J3QRK9 145 aa10.5□□□□□ -0.73
RAB5C-206ENST00000550406 HOXA3O43365 443 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-206ENST00000550406 OR8U9P0C7N5 309 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms