RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CD28P10747 220 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 PTHLHP12272 177 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 PRSS3P35030 304 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 GNG2P59768 71 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 MRPS10P82664 201 aaKnown RBP10.79□□□□□ -0.68
NUP188-211ENST00000550219 ZNF45Q02386 682 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 ARFRP1Q13795 201 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 IL18Q14116 193 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 ZNF79Q15937 498 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 BEAN1Q3B7T3 259 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 LDLRAD2Q5SZI1 272 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 FAM131AQ6UXB0 335 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 CCBE1Q6UXH8 406 aaPredicted RBP10.79□□□□□ -0.68
NUP188-211ENST00000550219 TRAPPC6BQ86SZ2 158 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 SNX29P2Q8IUI4 249 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 GPX8Q8TED1 209 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 NUDCD2Q8WVJ2 157 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 OCSTAMPQ9BR26 566 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 OR6C3Q9NZP0 311 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 ANAPC10Q9UM13 185 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 HILPDAQ9Y5L2 63 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 LINC00312Q9Y6C7 94 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 hADV38S2A0JD32 116 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 A6NDX4 124 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 VGLL3A8MV65 326 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 GABARAPH6UMI1 98 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 RBP4P02753 201 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 FCGR3AP08637 254 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 LSAMPQ13449 338 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 MADCAM1Q13477 382 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 TMEM95Q3KNT9 176 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 Q6ZS49 121 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 ZNF554Q86TJ5 538 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 OR13A1Q8NGR1 328 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 S100ZQ8WXG8 99 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 MALSU1Q96EH3 234 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 LINC00574Q9H8X3 128 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 Q9N2K0 584 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 SERTAD4Q9NUC0 356 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 ING3Q9NXR8 418 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 PITPNC1Q9UKF7 332 aa10.78□□□□□ -0.68
NUP188-211ENST00000550219 UBE2J1Q9Y385 318 aaPredicted RBP10.78□□□□□ -0.68
NUP188-211ENST00000550219 FAM172BPA6NC97 362 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 GSTZ1O43708 216 aaPredicted RBP10.77□□□□□ -0.69
NUP188-211ENST00000550219 ORC5O43913 435 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 LPLP06858 475 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 NAT1P18440 290 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 RCC1P18754 421 aaPredicted RBP10.77□□□□□ -0.69
NUP188-211ENST00000550219 GZMHP20718 246 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 CBX5P45973 191 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 MRPS15P82914 257 aaKnown RBP10.77□□□□□ -0.69
NUP188-211ENST00000550219 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 MOB1BQ7L9L4 216 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 ZNF565Q8N9K5 539 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 OR11H6Q8NGC7 330 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 OR4K15Q8NH41 348 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 CCDC107Q8WV48 283 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 R3HDM4Q96D70 268 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
NUP188-211ENST00000550219 PRSS22Q9GZN4 317 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 SRRQ9GZT4 340 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 TAS2R3Q9NYW6 316 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 MGAT4AQ9UM21 535 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 SESN1Q9Y6P5 492 aa10.77□□□□□ -0.69
NUP188-211ENST00000550219 PRKDCP78527 4128 aaKnown RBP10.77□□□□□ -0.69
NUP188-211ENST00000550219 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 TRGV10A0A0A0MS01 117 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 IGHV2-26A0A0B4J1V2 119 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 A0A1W2PRX2 142 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 NPIPB11E5RHQ5 1161 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 VDAC2P45880 294 aaPredicted RBP10.76□□□□□ -0.69
NUP188-211ENST00000550219 DGCR2P98153 550 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 HMGN3Q15651 99 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 C17orf58Q2M2W7 97 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 C6orf183Q5T699 404 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 TRAT1Q6PIZ9 186 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 Q6ZS46 218 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 HOGA1Q86XE5 327 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 GDPD1Q8N9F7 314 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 OR52I2Q8NH67 350 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 MRGPRDQ8TDS7 321 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 FCAMRQ8WWV6 532 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 SDHCQ99643 169 aaPredicted RBP10.76□□□□□ -0.69
NUP188-211ENST00000550219 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 MMP28Q9H239 520 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 TMEM133Q9H2Q1 129 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 CHMP1AQ9HD42 196 aaPredicted RBP10.76□□□□□ -0.69
NUP188-211ENST00000550219 MTFP1Q9UDX5 166 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 ZNF230Q9UIE0 474 aaPredicted RBP10.76□□□□□ -0.69
NUP188-211ENST00000550219 TRAPPC2LQ9UL33 140 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 RBMX2Q9Y388 322 aaKnown RBP10.76□□□□□ -0.69
NUP188-211ENST00000550219 TGP01266 2768 aa10.76□□□□□ -0.69
NUP188-211ENST00000550219 TRAV39A0A0B4J263 110 aa10.75□□□□□ -0.69
NUP188-211ENST00000550219 KBTBD11-OT1A0A1B0GTJ5 212 aa10.75□□□□□ -0.69
NUP188-211ENST00000550219 ZNF729A6NN14 1252 aaPredicted RBP10.75□□□□□ -0.69
NUP188-211ENST00000550219 TRDCB7Z8K6 153 aa10.75□□□□□ -0.69
NUP188-211ENST00000550219 C12orf77C9JDV5 145 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms