RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 LCNL1Q6ZST4 164 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 ZNF695Q8IW36 515 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 ODF3L1Q8IXM7 274 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 OR6M1Q8NGM8 313 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 SETD6Q8TBK2 473 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 IL1F10Q8WWZ1 152 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 DUX3Q96PT4 197 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 YPEL2Q96QA6 119 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 MRPL20Q9BYC9 149 aaKnown RBP12.84□□□□□ -0.35
VPS29-207ENST00000549970 CCDC90BQ9GZT6 254 aa12.84□□□□□ -0.35
VPS29-207ENST00000549970 A0A0A6YYD4 124 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 RGS10O43665 173 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 BPNT1O95861 308 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.36
VPS29-207ENST00000549970 BLVRBP30043 206 aaPredicted RBP12.83□□□□□ -0.36
VPS29-207ENST00000549970 SLC6A1P30531 599 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 MYCNOSP40205 109 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 OR3A3P47888 321 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 KRTAP10-11P60412 298 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 QRFPP83859 136 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 TMEM91Q6ZNR0 172 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 SVOPQ8N4V2 548 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 GON7Q9BXV9 100 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 DUSP21Q9H596 190 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 PLGRKTQ9HBL7 147 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 PLEKHJ1Q9NW61 149 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 ABRACLQ9P1F3 81 aa12.83□□□□□ -0.36
VPS29-207ENST00000549970 AK6Q9Y3D8 172 aaKnown RBP12.83□□□□□ -0.36
VPS29-207ENST00000549970 DNAH9Q9NYC9 4486 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 SAA2-SAA4A0A096LPE2 208 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 K7EIL1 84 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 SAA2P0DJI9 122 aaPredicted RBP12.82□□□□□ -0.36
VPS29-207ENST00000549970 ARSBP15848 533 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 VDAC1P21796 283 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 ACTBP60709 375 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 TPBGQ13641 420 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 CXorf66Q5JRM2 361 aaPredicted RBP12.82□□□□□ -0.36
VPS29-207ENST00000549970 DPF1Q92782 380 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 P2RX4Q99571 388 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 GFI1Q99684 422 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 NABP2Q9BQ15 211 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 ANKRD60Q9BZ19 345 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 STEAP1Q9UHE8 339 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 ZNF107Q9UII5 783 aaPredicted RBP12.82□□□□□ -0.36
VPS29-207ENST00000549970 LRRC42Q9Y546 428 aa12.82□□□□□ -0.36
VPS29-207ENST00000549970 SLC17A2O00624 439 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 ST8SIA5O15466 376 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 SOCS1O15524 211 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 NAPSAO96009 420 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 CD37P11049 281 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 CNTFRP26992 372 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 MAP2K4P45985 399 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 RAB25P57735 213 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 MLLT11Q13015 90 aaPredicted RBP12.81□□□□□ -0.36
VPS29-207ENST00000549970 FOXE3Q13461 319 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 TRAM1Q15629 374 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 DEFB136Q30KP8 78 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 LY6G6FQ5SQ64 297 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 ZNF833PQ6ZTB9 187 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 RAX2Q96IS3 184 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 RITA1Q96K30 269 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 ZNF251Q9BRH9 671 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 HDHD3Q9BSH5 251 aaPredicted RBP12.81□□□□□ -0.36
VPS29-207ENST00000549970 URM1Q9BTM9 101 aaKnown RBP12.81□□□□□ -0.36
VPS29-207ENST00000549970 GPR61Q9BZJ8 451 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 LPAR5Q9H1C0 372 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 IFI27L2Q9H2X8 130 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 ISYNA1Q9NPH2 558 aa12.81□□□□□ -0.36
VPS29-207ENST00000549970 WI2-2373I1.2A0A1W2PRP0 233 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 CCL24O00175 119 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 ARL6IP5O75915 188 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 ELANEP08246 267 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 CPEP16870 476 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 CRHBPP24387 322 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 PSMA1P25786 263 aaKnown RBP12.8□□□□□ -0.36
VPS29-207ENST00000549970 CALRP27797 417 aaKnown RBP12.8□□□□□ -0.36
VPS29-207ENST00000549970 CFHR3Q02985 330 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 EGFEM1PQ0D2K5 195 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 RAB11BQ15907 218 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 ZNF880Q6PDB4 577 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 MOB1BQ7L9L4 216 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 PRSS48Q7RTY5 328 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 KCTD7Q96MP8 289 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
VPS29-207ENST00000549970 AK3Q9UIJ7 227 aa12.8□□□□□ -0.36
VPS29-207ENST00000549970 NBR2O15453 112 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 IGF1P05019 195 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 CLDN12P56749 244 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 FABP5Q01469 135 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 DEFB121Q5J5C9 76 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 IZUMO2Q6UXV1 221 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 RNF152Q8N8N0 203 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 MGLLQ99685 303 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 PARP12Q9H0J9 701 aaKnown RBP12.79□□□□□ -0.36
VPS29-207ENST00000549970 VCX3BQ9H321 246 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 PIPOXQ9P0Z9 390 aa12.79□□□□□ -0.36
VPS29-207ENST00000549970 IGHG4P01861 327 aa12.78□□□□□ -0.36
VPS29-207ENST00000549970 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms