RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PRRT1Q99946 306 aa8□□□□□ -1.13
SMARCD1-206ENST00000549274 ABHD14AQ9BUJ0 271 aa8□□□□□ -1.13
SMARCD1-206ENST00000549274 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
SMARCD1-206ENST00000549274 PALMDQ9NP74 551 aa8□□□□□ -1.13
SMARCD1-206ENST00000549274 ZNF230Q9UIE0 474 aaPredicted RBP8□□□□□ -1.13
SMARCD1-206ENST00000549274 ELF5Q9UKW6 265 aaPredicted RBP8□□□□□ -1.13
SMARCD1-206ENST00000549274 RBM7Q9Y580 266 aaKnown RBP8□□□□□ -1.13
SMARCD1-206ENST00000549274 IGHV2-26A0A0B4J1V2 119 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 FAM172BPA6NC97 362 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 MEIS3P1A6NDR6 274 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 FCER2P06734 321 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 PTHLHP12272 177 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 IL7P13232 177 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 HOXB4P17483 251 aaPredicted RBP7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 HTR1DP28221 377 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 SRP14P37108 136 aaKnown RBP7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 CEACAM6P40199 344 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 LUMP51884 338 aaPredicted RBP7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 LOXL3P58215 753 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 MADCAM1Q13477 382 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 MORN2Q502X0 79 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 ZNF626Q68DY1 528 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 MZT2BQ6NZ67 158 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 C11orf88Q6PI97 169 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 DHRS11Q6UWP2 260 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 SLC25A48Q6ZT89 311 aaKnown RBP7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 ZBTB34Q8NCN2 500 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 SNAPC3Q92966 411 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 LHX4Q969G2 390 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 TRIM63Q969Q1 353 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 TBX15Q96SF7 602 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 S1PR3Q99500 378 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 SUCNR1Q9BXA5 334 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 MMP28Q9H239 520 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 SIRT7Q9NRC8 400 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 YAE1D1Q9NRH1 226 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 SLC2A8Q9NY64 477 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 ZNF221Q9UK13 617 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 NUP50Q9UKX7 468 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 OR2W1Q9Y3N9 320 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 ZNF469Q96JG9 3925 aaPredicted RBP7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 HIVEP2P31629 2446 aa7.99□□□□□ -1.13
SMARCD1-206ENST00000549274 CSPG4Q6UVK1 2322 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 CELSR1Q9NYQ6 3014 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 TRAV39A0A0B4J263 110 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 TRAV40A0A0B4J280 105 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 PIGBOS1A0A0B4J2F0 54 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 IGHV1-69DA0A0B4J2H0 117 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 LEUTXA8MZ59 168 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 J3QR06 171 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 RAB29O14966 203 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 UPK1BO75841 260 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 IGHV1-69P01742 117 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 CD3DP04234 171 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 ARG1P05089 322 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 OMGP23515 440 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 HLA-DMAP28067 261 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 ZNF137PP52743 207 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 LTC4SQ16873 150 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 HLA-DRB5Q30154 266 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 IGSF11Q5DX21 431 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 RNASE12Q5GAN4 147 aaKnown RBP7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 ZNF782Q6ZMW2 699 aaPredicted RBP7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 H1FOOQ8IZA3 346 aaPredicted RBP7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 PNKDQ8N490 385 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 C11orf42Q8N5U0 333 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 OR10V1Q8NGI7 309 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 ZFAND1Q8TCF1 268 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 MAFIPQ8WZ33 124 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 MALSU1Q96EH3 234 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 RHOVQ96L33 236 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 RDH8Q9NYR8 311 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 COPZ2Q9P299 210 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 DPM3Q9P2X0 92 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 PSG11Q9UQ72 335 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 GAB2Q9UQC2 676 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 NAV3Q8IVL0 2385 aa7.98□□□□□ -1.13
SMARCD1-206ENST00000549274 ODF3BA8MYP8 253 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 RNASEK-C17orf49H0YIS7 233 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 NPFFO15130 113 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 TUSC2O75896 110 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 PPYP01298 95 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 IGLV1-47P01700 117 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 PMP2P02689 132 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 AMY2AP04746 511 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 FBP1P09467 338 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 FCGR2CP31995 323 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 PPP1CCP36873 323 aaKnown RBP7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 GPR12P47775 334 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 RFX2P48378 723 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 UCP3P55916 312 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 CBX3Q13185 183 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 KLF9Q13886 244 aaPredicted RBP7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 HERPUD1Q15011 391 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 SURF2Q15527 256 aaPredicted RBP7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 C16orf87Q6PH81 154 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 C9orf139Q6ZV77 190 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 LYSMD2Q8IV50 215 aa7.97□□□□□ -1.13
SMARCD1-206ENST00000549274 CMTM1Q8IZ96 169 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms