RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 RAB14P61106 215 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 EIF5AP63241 154 aaKnown RBP11.19□□□□□ -0.62
PTCH1-215ENST00000547672 IFITM2Q01629 132 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 Q3ZCU0 254 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 MEX3BQ6ZN04 569 aaKnown RBP11.19□□□□□ -0.62
PTCH1-215ENST00000547672 SLC51BQ86UW2 128 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 KCNRGQ8N5I3 272 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-215ENST00000547672 OR8H1Q8NGG4 311 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 TP53RKQ96S44 253 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 PLEKHA2Q9HB19 425 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 CALYQ9NYX4 217 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 SLC25A10Q9UBX3 287 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-215ENST00000547672 CACFD1Q9UGQ2 172 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 LINC00312Q9Y6C7 94 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 DSPP15924 2871 aaKnown RBP11.19□□□□□ -0.62
PTCH1-215ENST00000547672 CHD6Q8TD26 2715 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 A0A1B0GU03 582 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 B8ZZF3 427 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 E5RGE8 158 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 TAAR5O14804 337 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 ST8SIA3O43173 380 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 PLAUP00749 431 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 CGB3P0DN86 165 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 CGB7P0DN87 165 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 NDUFB7P17568 137 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 LOXP28300 417 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-215ENST00000547672 IL15RAQ13261 267 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 GNMTQ14749 295 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 LRRC37A5PQ49AS3 106 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 TEX261Q6UWH6 196 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 FAM219AQ8IW50 185 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 SELENOHQ8IZQ5 122 aaKnown RBP11.18□□□□□ -0.62
PTCH1-215ENST00000547672 DRAM1Q8N682 238 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 OR52L2PQ8NGH6 319 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 DCUN1D4Q92564 292 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 NEUROG1Q92886 237 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 RAB1CQ92928 201 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 LSM10Q969L4 123 aaKnown RBP11.18□□□□□ -0.62
PTCH1-215ENST00000547672 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
PTCH1-215ENST00000547672 OR10C1Q96KK4 312 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 NSG2Q9Y328 171 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 U3KQ87 197 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 CHD8Q9HCK8 2581 aa11.18□□□□□ -0.62
PTCH1-215ENST00000547672 TRBV23-1A0A0A0MS06 115 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 CLEC18AA5D8T8 446 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 ADAM20O43506 726 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 MMP9P14780 707 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 CXCL2P19875 107 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 KIR2DS2P43631 304 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 GPR12P47775 334 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 SNTB1Q13884 538 aaKnown RBP11.17□□□□□ -0.62
PTCH1-215ENST00000547672 MORN2Q502X0 79 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 GPR157Q5UAW9 335 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 LYZL2Q7Z4W2 148 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 ZCCHC24Q8N2G6 241 aaKnown RBP11.17□□□□□ -0.62
PTCH1-215ENST00000547672 CLEC18CQ8NCF0 446 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 RNASE11Q8TAA1 199 aaKnown RBP11.17□□□□□ -0.62
PTCH1-215ENST00000547672 ADTRPQ96IZ2 230 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 IDI2-AS1Q9NZ38 188 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 MBD2Q9UBB5 411 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 UBQLN2Q9UHD9 624 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 HCFC1P51610 2035 aa11.17□□□□□ -0.62
PTCH1-215ENST00000547672 TPRP12270 2363 aaKnown RBP11.17□□□□□ -0.62
PTCH1-215ENST00000547672 A0A1B0GW55 424 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-215ENST00000547672 SIAH2O43255 324 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DUX4L2P0CJ85 424 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DUX4L3P0CJ86 424 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DUX4L4P0CJ87 422 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DUX4L5P0CJ88 424 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DUX4L6P0CJ89 424 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DUX4L7P0CJ90 424 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 SSTR5P35346 364 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 PPP1CCP36873 323 aaKnown RBP11.16□□□□□ -0.62
PTCH1-215ENST00000547672 ARHGDIBP52566 201 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 AP2S1P53680 142 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-215ENST00000547672 S100A10P60903 97 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 RPL31P62899 125 aaKnown RBP11.16□□□□□ -0.62
PTCH1-215ENST00000547672 CDSNQ15517 529 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 FAM201AQ5SY85 155 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DTX2Q86UW9 622 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 PIP4P2Q8N4L2 257 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 FAM71E2Q8N5Q1 922 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 TPRX1Q8N7U7 411 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 SLC35G3Q8N808 338 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 ZNF680Q8NEM1 530 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 RFESDQ8TAC1 157 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 AIFM2Q9BRQ8 373 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 RNF126Q9BV68 326 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 ZC4H2Q9NQZ6 224 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 GFOD1Q9NXC2 390 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 DUX4Q9UBX2 424 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 MIOXQ9UGB7 285 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 PRELID3BQ9Y3B1 194 aa11.16□□□□□ -0.62
PTCH1-215ENST00000547672 hCG_1809904A0A1W2PP81 198 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 A0A1W2PPE2 198 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms