RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 FAM131AQ6UXB0 335 aa18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 SLC25A48Q6ZT89 311 aaKnown RBP18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 C17orf50Q8WW18 174 aa18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 AJUBAQ96IF1 538 aa18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 ZNF48Q96MX3 618 aaPredicted RBP18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 SOSTQ9BQB4 213 aa18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 ANAPC10Q9UM13 185 aa18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 LEUTXA8MZ59 168 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 CEACAM3P40198 252 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 ZNF134P52741 427 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 ARPC4P59998 168 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 CT45A1Q5HYN5 189 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 RBMS3Q6XE24 437 aaKnown RBP18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 OR2AK2Q8NG84 335 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 CT45A3Q8NHU0 189 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 ZNF418Q8TF45 676 aaPredicted RBP18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 SNAPC3Q92966 411 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 ZDHHC16Q969W1 377 aa18.78■□□□□ 0.6
SMARCD1-203ENST00000547247 MDFIC2A0A1B0GVS7 189 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 SLC31A2O15432 143 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 NAT1P18440 290 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 RNASE12Q5GAN4 147 aaKnown RBP18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 CCDC190Q86UF4 302 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 SIGLECL1Q8N7X8 197 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 OR52I2Q8NH67 350 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 FCAMRQ8WWV6 532 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 EDARADDQ8WWZ3 215 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 GINS4Q9BRT9 223 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 ABHD14AQ9BUJ0 271 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 PRDM13Q9H4Q3 707 aa18.77■□□□□ 0.6
SMARCD1-203ENST00000547247 GABARAPH6UMI1 98 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 CTDSPLO15194 276 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 SSX2Q16385 188 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 TOLLIPQ9H0E2 274 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 RDH8Q9NYR8 311 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 HILPDAQ9Y5L2 63 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 CUBNO60494 3623 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 ITGB1BP1O14713 200 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 RBBP9O75884 186 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 RCVRNP35243 200 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 SPANXN2Q5MJ10 180 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 OR5AP2Q8NGF4 316 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 PARP12Q9H0J9 701 aaKnown RBP18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 MEGF9Q9H1U4 602 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 KLK11Q9UBX7 282 aa18.76■□□□□ 0.59
SMARCD1-203ENST00000547247 LY6LH3BQJ8 138 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 IFNA2P01563 188 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 IL3RAP26951 378 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 RAB7AP51149 207 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 DGCR2P98153 550 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 PRIMA1Q86XR5 153 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 SMIM4Q8WVI0 70 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 NECAP2Q9NVZ3 263 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 PTTG2Q9NZH5 202 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 MTFP1Q9UDX5 166 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 V9GYH0 126 aa18.75■□□□□ 0.59
SMARCD1-203ENST00000547247 PAX6P26367 422 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 PTBP1P26599 531 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 ETV6P41212 452 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 TAS2R46P59540 309 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 ACTBP60709 375 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 ACTG1P63261 375 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 TPTE2P1Q5T6R2 138 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 Q6YL49 198 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 LDLRAD3Q86YD5 345 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 DYNAPQ8N1N2 210 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 RPEQ96AT9 228 aa18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 C11orf54Q9H0W9 315 aaPredicted RBP18.74■□□□□ 0.59
SMARCD1-203ENST00000547247 OR3A3P47888 321 aa18.73■□□□□ 0.59
SMARCD1-203ENST00000547247 CDK10Q15131 360 aa18.73■□□□□ 0.59
SMARCD1-203ENST00000547247 LYSMD2Q8IV50 215 aa18.73■□□□□ 0.59
SMARCD1-203ENST00000547247 H1FOOQ8IZA3 346 aaPredicted RBP18.73■□□□□ 0.59
SMARCD1-203ENST00000547247 LYG1Q8N1E2 194 aa18.73■□□□□ 0.59
SMARCD1-203ENST00000547247 TOMM40LQ969M1 308 aa18.73■□□□□ 0.59
SMARCD1-203ENST00000547247 OOSP1A8MZH6 123 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 ST8SIA5O15466 376 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 ZNF137PP52743 207 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 OR5H2Q8NGV7 314 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 AGMATQ9BSE5 352 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 IFI27L2Q9H2X8 130 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 GHITMQ9H3K2 345 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 A0A0A6YYJ9 748 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 GSTZ1O43708 216 aaPredicted RBP18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 OR5H8P0DN80 308 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 HLA-DMAP28067 261 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 ARHGDIBP52566 201 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 SSBP1Q04837 148 aaKnown RBP18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 BAMBIQ13145 260 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 PYDC2Q56P42 97 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 CCDC144NLQ6NUI1 221 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 ST6GALNAC6Q969X2 333 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 JMJD8Q96S16 334 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 PIPOXQ9P0Z9 390 aa18.72■□□□□ 0.59
SMARCD1-203ENST00000547247 JMJD1CQ15652 2540 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 TCF21O43680 179 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 NFYAP23511 347 aaPredicted RBP18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 HILS1P60008 231 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 DIAPH2-AS1Q14236 149 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 ZNF79Q15937 498 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 AANATQ16613 207 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms