RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 PKIBQ9C010 78 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 CXXC4Q9H2H0 198 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 PLSCR4Q9NRQ2 329 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 A8MXK9 166 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 IQCF6A8MYZ5 107 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 PRRG2O14669 202 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 OR4A4PQ8NGN8 299 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 OR2G3Q8NGZ4 309 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 COL25A1Q9BXS0 654 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-209ENST00000547018 GLS2Q9UI32 602 aa10.7□□□□□ -0.7
SCAF11-209ENST00000547018 TRBV6-7A0A0A0MS04 114 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 MUC1P15941 1255 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-209ENST00000547018 TESK1Q15569 626 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 FAM76BQ5HYJ3 339 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 EIF5AL1Q6IS14 154 aaKnown RBP10.69□□□□□ -0.7
SCAF11-209ENST00000547018 DMBX1Q8NFW5 382 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 CD300LFQ8TDQ1 290 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 HINT2Q9BX68 163 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 BARX1Q9HBU1 254 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-209ENST00000547018 TMEM30CPA0ZSE6 113 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 SHOXO15266 292 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 JTBO76095 146 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 OR13C7P0DN81 318 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 KLF3P57682 345 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-209ENST00000547018 B2MP61769 119 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 UTF1Q5T230 341 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 C1orf185Q5T7R7 199 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 C11orf53Q8IXP5 236 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 AKR1E2Q96JD6 320 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 TRGV8A0A0C4DH27 118 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 SNAPC5O75971 98 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 CLDN1O95832 211 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 CTXN2P0C2S0 81 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 DAOP14920 347 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 VDAC1P21796 283 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 PTAFRP25105 342 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 PRDX2P32119 198 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 IGFL2Q6UWQ7 119 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 ACP7Q6ZNF0 438 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 HSD17B13Q7Z5P4 300 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-209ENST00000547018 SPACA3Q8IXA5 215 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 PIGMQ9H3S5 423 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 AUP1Q9Y679 476 aa10.69□□□□□ -0.7
SCAF11-209ENST00000547018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.69□□□□□ -0.73e-6■■■■■ 33.8
SCAF11-209ENST00000547018 FAM157CP0CG43 387 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 IL13RA2Q14627 380 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 SMIM21Q3B7S5 101 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 ZNF497Q6ZNH5 498 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 Q6ZS92 163 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 THNSL2Q86YJ6 484 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 H1FOOQ8IZA3 346 aaPredicted RBP10.68□□□□□ -0.7
SCAF11-209ENST00000547018 SPAG16Q8N0X2 631 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 TMEM252Q8N6L7 170 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 CD177Q8N6Q3 437 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 COQ2Q96H96 371 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 DHRS9Q9BPW9 319 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 SPOCK3Q9BQ16 436 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 DECR2Q9NUI1 292 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 TUBD1Q9UJT1 453 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 NUP50Q9UKX7 468 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 HOXD4P09016 255 aaPredicted RBP10.68□□□□□ -0.7
SCAF11-209ENST00000547018 CTRB1P17538 263 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 GNG10P50151 68 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 RPL30P62888 115 aaKnown RBP10.68□□□□□ -0.7
SCAF11-209ENST00000547018 P2RY6Q15077 328 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 HAGHQ16775 308 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 CTRB2Q6GPI1 263 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 SPIN2AQ99865 258 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 SPIN2BQ9BPZ2 258 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 RIMS4Q9H426 269 aaPredicted RBP10.68□□□□□ -0.7
SCAF11-209ENST00000547018 PLEKHA2Q9HB19 425 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 ZNRD1Q9P1U0 126 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 SLC25A15Q9Y619 301 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A18PA6NE21 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A16PA6NEW6 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A20PA6NIJ5 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A8PA6NJQ4 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A22PA8MWA6 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 C9JQL5 133 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 M0R036 132 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 GPR137BO60478 399 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 CDS2O95674 445 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 OPN1MWP04001 364 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 OPN1MW2P0DN77 364 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 OPN1MW3P0DN78 364 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 COX5AP20674 150 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 ELLP55199 621 aaPredicted RBP10.68□□□□□ -0.7
SCAF11-209ENST00000547018 EIF5AP63241 154 aaKnown RBP10.68□□□□□ -0.7
SCAF11-209ENST00000547018 TMEM171Q8WVE6 324 aa10.68□□□□□ -0.7
SCAF11-209ENST00000547018 CCL13Q99616 98 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms