RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 LFNGQ8NES3 379 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 OR5D13Q8NGL4 314 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 OR4X1Q8NH49 305 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 MOB3AQ96BX8 217 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 C18orf12Q96KH6 178 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 OR4C12Q96R67 309 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 PAM16Q9Y3D7 125 aa12.52□□□□□ -0.4
HOXC11-202ENST00000546378 CHCHD2Q9Y6H1 151 aaPredicted RBP12.52□□□□□ -0.4
HOXC11-202ENST00000546378 TRAV38-1A0A0B4J264 116 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 S100GP29377 79 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 HERPUD1Q15011 391 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 RCC1LQ96I51 464 aaKnown RBP12.52□□□□□ -0.41
HOXC11-202ENST00000546378 KIAA1456Q9P272 454 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 PLXNB1O43157 2135 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 GNB2P62879 340 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 VKORC1L1Q8N0U8 176 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 NABP1Q96AH0 204 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.41
HOXC11-202ENST00000546378 FOLR2P14207 255 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 ZNF25P17030 456 aaPredicted RBP12.51□□□□□ -0.41
HOXC11-202ENST00000546378 TUSC5Q8IXB3 177 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 GCNT2Q8N0V5 402 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 DERL1Q9BUN8 251 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 CHRNA10Q9GZZ6 450 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
HOXC11-202ENST00000546378 C19orf25Q9UFG5 118 aaPredicted RBP12.51□□□□□ -0.41
HOXC11-202ENST00000546378 TOX3O15405 576 aaPredicted RBP12.51□□□□□ -0.41
HOXC11-202ENST00000546378 GLIPR1P48060 266 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 CARFQ8N187 725 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 GALNT14Q96FL9 552 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 LOXL2Q9Y4K0 774 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 V9GYS6 101 aa12.51□□□□□ -0.41
HOXC11-202ENST00000546378 PGLYRP1O75594 196 aaPredicted RBP12.5□□□□□ -0.41
HOXC11-202ENST00000546378 LYL1P12980 280 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 MPZP25189 248 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 CEACAM6P40199 344 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 TCL1AP56279 114 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 ZNF826PQ6ZT77 177 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 LHFPL2Q6ZUX7 228 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 TAAR9Q96RI9 348 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 ATP5SQ99766 215 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 MTCH1Q9NZJ7 389 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 HIST1H1BP16401 226 aaKnown RBP12.5□□□□□ -0.41
HOXC11-202ENST00000546378 ZNF664Q8N3J9 261 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 APC2O95996 2303 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 BCL2P10415 239 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 VDAC1P21796 283 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 CFPP27918 469 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 TFPI2P48307 235 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 KIAA1644Q3SXP7 199 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 SPSB1Q96BD6 273 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 OR2H1Q9GZK4 316 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 WNT5BQ9H1J7 359 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 PRSS50Q9UI38 385 aa12.5□□□□□ -0.41
HOXC11-202ENST00000546378 IGKV1-6A0A0C4DH72 117 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 CDIPTO14735 213 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 ACTL6BO94805 426 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 FUT6P51993 359 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 TOMM20LQ6UXN7 152 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 OR10A7Q8NGE5 316 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 GNPNAT1Q96EK6 184 aaPredicted RBP12.49□□□□□ -0.41
HOXC11-202ENST00000546378 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
HOXC11-202ENST00000546378 DEGS1O15121 323 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 RAMP3O60896 148 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 PTBP3O95758 552 aaKnown RBP12.49□□□□□ -0.41
HOXC11-202ENST00000546378 FGF7P21781 194 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 PLGLB1Q02325 96 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 TMEM256Q8N2U0 113 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 ZNF709Q8N972 641 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 SSMEM1Q8WWF3 244 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 SEMA5BQ9P283 1151 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 SYNGR2O43760 224 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 AMBPP02760 352 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 GZMHP20718 246 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 TFF3Q07654 80 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 BSXQ3C1V8 233 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 DCAF12Q5T6F0 453 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 ABHD14BQ96IU4 210 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 EGLN1Q9GZT9 426 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 TMEM38BQ9NVV0 291 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 TAAR3PQ9P1P4 343 aa12.49□□□□□ -0.41
HOXC11-202ENST00000546378 GABRA2P47869 451 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 TAS2R30P59541 319 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 TMEM41BQ5BJD5 291 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 ATOH7Q8N100 152 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 MRPL30Q8TCC3 161 aaKnown RBP12.48□□□□□ -0.41
HOXC11-202ENST00000546378 CPT1CQ8TCG5 803 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 TM2D1Q9BX74 207 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 GCM1Q9NP62 436 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 A0A0U1RQV5 110 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 PITX3O75364 302 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 NXPH2O95156 264 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 RAB35Q15286 201 aa12.48□□□□□ -0.41
HOXC11-202ENST00000546378 ZNF726P1Q15940 193 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms