RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 PCOLCEQ15113 449 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 OR8G2PQ6IF36 304 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 C20orf204Q6ZNR8 217 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 CADM4Q8NFZ8 388 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 PSMF1Q92530 271 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 PRDM14Q9GZV8 571 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 FGF23Q9GZV9 251 aaPredicted RBP12.08□□□□□ -0.48
SRP54-202ENST00000546080 PROK2Q9HC23 129 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 MTCH1Q9NZJ7 389 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 ZNF16P17020 682 aaPredicted RBP12.07□□□□□ -0.48
SRP54-202ENST00000546080 PRSS8Q16651 343 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 IL1F10Q8WWZ1 152 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 WFIKKN1Q96NZ8 548 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 RBM14Q96PK6 669 aaKnown RBP12.07□□□□□ -0.48
SRP54-202ENST00000546080 DCAF16Q9NXF7 216 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 PPP1R3CQ9UQK1 317 aa12.07□□□□□ -0.48
SRP54-202ENST00000546080 KIAA1549Q9HCM3 1950 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 KIR2DL5BA0A0G2JN68 375 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 KIR2DL5BA0A0G2JPC4 375 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 ZNF716A6NP11 495 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 HS3ST1O14792 307 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 WNT2P09544 360 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 TDGF1P3P51864 188 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 CARD18P57730 90 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 KIR2DL5AQ8N109 375 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 OR5T1Q8NG75 326 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 GATAD1Q8WUU5 269 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 STRADBQ9C0K7 418 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 GPR35Q9HC97 309 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 TMEM9BQ9NQ34 198 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 POLR3KQ9Y2Y1 108 aaPredicted RBP12.06□□□□□ -0.48
SRP54-202ENST00000546080 CBR3O75828 277 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 CCNOP22674 350 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 SSR4P51571 173 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
SRP54-202ENST00000546080 OR10G9Q8NGN4 311 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 OR10G7Q8NGN6 311 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 RDH5Q92781 318 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 THOC3Q96J01 351 aaKnown RBP12.06□□□□□ -0.48
SRP54-202ENST00000546080 REPIN1Q9BWE0 567 aaKnown RBP12.06□□□□□ -0.48
SRP54-202ENST00000546080 AKIRIN1Q9H9L7 192 aaPredicted RBP12.06□□□□□ -0.48
SRP54-202ENST00000546080 LIN7CQ9NUP9 197 aaKnown RBP12.06□□□□□ -0.48
SRP54-202ENST00000546080 CRIM1Q9NZV1 1036 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 OR1A1Q9P1Q5 309 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 NAGKQ9UJ70 344 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
SRP54-202ENST00000546080 RBM7Q9Y580 266 aaKnown RBP12.06□□□□□ -0.48
SRP54-202ENST00000546080 TRBV6-6A0A0A6YYG2 114 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 IFNL4K9M1U5 179 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 DEGS1O15121 323 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 VENTXO95231 258 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 CLDN1O95832 211 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 MBP02144 154 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 ZNF25P17030 456 aaPredicted RBP12.05□□□□□ -0.48
SRP54-202ENST00000546080 RAB4AP20338 218 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 PLA2G5P39877 138 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 LCN2P80188 198 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 FAM78BQ5VT40 261 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 CYB5R2Q6BCY4 276 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 MRPL21Q7Z2W9 205 aaKnown RBP12.05□□□□□ -0.48
SRP54-202ENST00000546080 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 NEIL1Q96FI4 390 aaPredicted RBP12.05□□□□□ -0.48
SRP54-202ENST00000546080 LAMA1P25391 3075 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 TMEM210A6NLX4 147 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 SYNGR1O43759 233 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 CXCL13O43927 109 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 SOX15O60248 233 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 IL3RAP26951 378 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 OR10J1P30954 320 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 CHRNA7P36544 502 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 PPP1CBP62140 327 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 RIPPLY2Q5TAB7 128 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 LINC00596Q86U02 117 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 YRDCQ86U90 279 aaKnown RBP12.05□□□□□ -0.48
SRP54-202ENST00000546080 PPP1R14DQ9NXH3 145 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 TRAPPC1Q9Y5R8 145 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 SPAG17Q6Q759 2223 aa12.05□□□□□ -0.48
SRP54-202ENST00000546080 PAGE4O60829 102 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 IGLV2-14P01704 120 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 ZNF585BQ52M93 769 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 FFAR4Q5NUL3 377 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 MRPL14Q6P1L8 145 aaKnown RBP12.04□□□□□ -0.48
SRP54-202ENST00000546080 TMEM14EPQ6UXP3 125 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 COLCA1Q6ZS62 124 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 PCED1AQ9H1Q7 454 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 PLA2G3Q9NZ20 509 aa12.04□□□□□ -0.48
SRP54-202ENST00000546080 IGHV1-45A0A0A0MS14 117 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 ZNF705FA8MVS1 300 aaPredicted RBP12.03□□□□□ -0.48
SRP54-202ENST00000546080 FAM90A26D6RGX4 464 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 ZNHIT1O43257 154 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 PDGFBP01127 241 aaPredicted RBP12.03□□□□□ -0.48
SRP54-202ENST00000546080 ZNF705DP0CH99 300 aaPredicted RBP12.03□□□□□ -0.48
SRP54-202ENST00000546080 ZNF705BP0CI00 300 aaPredicted RBP12.03□□□□□ -0.48
SRP54-202ENST00000546080 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 PRR18Q8N4B5 295 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms