RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 OR5R1Q8NH85 324 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 TMEM158Q8WZ71 300 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 TOMM40LQ969M1 308 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 CREB3L1Q96BA8 519 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 C19orf24Q9BVV8 132 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 MIXL1Q9H2W2 232 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 VPREB3Q9UKI3 123 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 BTBD17A6NE02 478 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 OOSP1A8MZH6 123 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 GPR137BO60478 399 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 RGS11O94810 467 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 DYNLT3P51808 116 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 LY6EQ16553 131 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 LY6G6FQ5SQ64 297 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 TMEM69Q5SWH9 247 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 C16orf87Q6PH81 154 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 TAF15Q92804 592 aaKnown RBP eCLIP12.15□□□□□ -0.46
CD9-210ENST00000543916 GCDHQ92947 438 aaPredicted RBP12.15□□□□□ -0.46
CD9-210ENST00000543916 ST6GALNAC6Q969X2 333 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 RPEQ96AT9 228 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 CABLES2Q9BTV7 478 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 ABHD14AQ9BUJ0 271 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 ST6GALNAC5Q9BVH7 336 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 RSL24D1Q9UHA3 163 aaKnown RBP12.15□□□□□ -0.46
CD9-210ENST00000543916 ATRQ13535 2644 aa12.15□□□□□ -0.46
CD9-210ENST00000543916 A0A1W2PPI3 338 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 FAM181BA6NEQ2 426 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 HSD17B6O14756 317 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 BET1O15155 118 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 ZBTB25P24278 435 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 CEACAM6P40199 344 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 MNDAP41218 407 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 REG1BP48304 166 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 FBLN7Q53RD9 439 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 LAX1Q8IWV1 398 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 ODF3L1Q8IXM7 274 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 GVQW1Q8N7I0 195 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 SLIRPQ9GZT3 109 aaKnown RBP12.14□□□□□ -0.47
CD9-210ENST00000543916 ABCB10Q9NRK6 738 aa12.14□□□□□ -0.47
CD9-210ENST00000543916 TRBV6-7A0A0A0MS04 114 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 MEIS3P1A6NDR6 274 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 FAM25AB3EWG3 89 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 FAM25CB3EWG5 89 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 FAM25GB3EWG6 89 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 CTDSP2O14595 271 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 TIMM23O14925 209 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 HSPA12AO43301 675 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 CD24P25063 80 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 RAB7AP51149 207 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 ZNF137PP52743 207 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 ZNF816Q0VGE8 651 aaPredicted RBP12.13□□□□□ -0.47
CD9-210ENST00000543916 CCDC144NLQ6NUI1 221 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 CCBE1Q6UXH8 406 aaPredicted RBP12.13□□□□□ -0.47
CD9-210ENST00000543916 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 RTN4IP1Q8WWV3 396 aaPredicted RBP12.13□□□□□ -0.47
CD9-210ENST00000543916 CFHR4Q92496 578 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 IFI27L2Q9H2X8 130 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 TCF19Q9Y242 345 aa12.13□□□□□ -0.47
CD9-210ENST00000543916 A6NDX4 124 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
CD9-210ENST00000543916 RGS5O15539 181 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 CHST1O43916 411 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 DIRAS3O95661 229 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 FCER2P06734 321 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 IL3RAP26951 378 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 ACTG1P63261 375 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 HOGA1Q86XE5 327 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 TMEM219Q86XT9 240 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 OR8H3Q8N146 312 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 BEST4Q8NFU0 473 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 TOLLIPQ9H0E2 274 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 C11orf54Q9H0W9 315 aaPredicted RBP12.12□□□□□ -0.47
CD9-210ENST00000543916 RDH8Q9NYR8 311 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 EXTL2Q9UBQ6 330 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
CD9-210ENST00000543916 MRPS7Q9Y2R9 242 aaKnown RBP12.12□□□□□ -0.47
CD9-210ENST00000543916 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 SMIM31A0A1B0GVY4 71 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 DPPA5A6NC42 116 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
CD9-210ENST00000543916 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
CD9-210ENST00000543916 BRS3P32247 399 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 PRSS3P35030 304 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 CBX5P45973 191 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 OR3A3P47888 321 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 ARHGDIBP52566 201 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 RELBQ01201 579 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 FOXB2Q5VYV0 432 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 SNX29P2Q8IUI4 249 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 DRAM1Q8N682 238 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 OR10J5Q8NHC4 309 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 SNAPC3Q92966 411 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms