RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 IGFL3Q6UXB1 125 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 WDR82Q6UXN9 313 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 RNASE11Q8TAA1 199 aaKnown RBP11.71□□□□□ -0.54
MSH2-206ENST00000543555 LSM10Q969L4 123 aaKnown RBP11.71□□□□□ -0.54
MSH2-206ENST00000543555 MSL2Q9HCI7 577 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 KCNIP1Q9NZI2 227 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 CST7O76096 145 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 NPBWR1P48145 328 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 DYNLT3P51808 116 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
MSH2-206ENST00000543555 TMEM88Q6PEY1 159 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 ACP7Q6ZNF0 438 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 TMEM182Q6ZP80 229 aaPredicted RBP11.7□□□□□ -0.54
MSH2-206ENST00000543555 LIN7CQ9NUP9 197 aaKnown RBP11.7□□□□□ -0.54
MSH2-206ENST00000543555 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
MSH2-206ENST00000543555 K7N7A8 449 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 Q6ZRM9 215 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 BEND4Q6ZU67 534 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 DRAM1Q8N682 238 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 UFSP2Q9NUQ7 469 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 TOR1AO14656 332 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 IZUMO4Q1ZYL8 232 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 ZNF585BQ52M93 769 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 DHRS7BQ6IAN0 325 aaPredicted RBP11.7□□□□□ -0.54
MSH2-206ENST00000543555 FAM169BQ8N8A8 192 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 OR1L1Q8NH94 360 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 SLC25A15Q9Y619 301 aa11.7□□□□□ -0.54
MSH2-206ENST00000543555 C12orf77C9JDV5 145 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
MSH2-206ENST00000543555 OR3A1P47881 315 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 AESQ08117 197 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 C1orf174Q8IYL3 243 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 TMEM217Q8N7C4 229 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 GALMQ96C23 342 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 EPG5Q9HCE0 2579 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 CACNA1BQ00975 2339 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 CD200P41217 278 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 CBLN2Q8IUK8 224 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 ZNF295-AS1Q8N0V1 137 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 OR2G3Q8NGZ4 309 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 CACNG5Q9UF02 275 aa11.69□□□□□ -0.54
MSH2-206ENST00000543555 A0A1B0GWJ7 208 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 OOEPA6NGQ2 149 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 PTBP3O95758 552 aaKnown RBP11.68□□□□□ -0.54
MSH2-206ENST00000543555 GUK1Q16774 197 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 COQ2Q96H96 371 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 RAB40CQ96S21 281 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 TFF1P04155 84 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 FAM87AP0C7U9 286 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 RPL23AP62750 156 aaKnown RBP11.68□□□□□ -0.54
MSH2-206ENST00000543555 Q6ZS92 163 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 ADGRG4Q8IZF6 3080 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 UMAD1C9J7I0 102 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 TXNL1O43396 289 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 H2AFB1P0C5Y9 115 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 IL2RGP31785 369 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 PLA2G5P39877 138 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 PPT1P50897 306 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 PEA15Q15121 130 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 SMIM21Q3B7S5 101 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 STX12Q86Y82 276 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 KPTNQ9Y664 436 aa11.68□□□□□ -0.54
MSH2-206ENST00000543555 RNF212BA8MTL3 300 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 H3BP45 60 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 HBZP02008 142 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 GABRA2P47869 451 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 ZNF645Q8N7E2 425 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 ABHD17AQ96GS6 310 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 ATP5SQ99766 215 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 COL10A1Q03692 680 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 ZBTB34Q8NCN2 500 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 OR52L2PQ8NGH6 319 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 MRGPRDQ8TDS7 321 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 GNPNAT1Q96EK6 184 aaPredicted RBP11.67□□□□□ -0.54
MSH2-206ENST00000543555 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 FAM215AQ9Y5M1 114 aa11.67□□□□□ -0.54
MSH2-206ENST00000543555 PPP1CCP36873 323 aaKnown RBP11.66□□□□□ -0.54
MSH2-206ENST00000543555 SULT1A1P50225 295 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 MZT1Q08AG7 82 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 LFNGQ8NES3 379 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 EIF5A2Q9GZV4 153 aaKnown RBP11.66□□□□□ -0.54
MSH2-206ENST00000543555 TOLLIPQ9H0E2 274 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 OR2D2Q9H210 308 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 SYNGR2O43760 224 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 NFYBP25208 207 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 FAM53AQ6NSI3 398 aaPredicted RBP11.66□□□□□ -0.54
MSH2-206ENST00000543555 ZNF474Q6S9Z5 364 aaPredicted RBP11.66□□□□□ -0.54
MSH2-206ENST00000543555 RPRMLQ8N4K4 120 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 LRRC29Q8WV35 223 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 ESRP2Q9H6T0 727 aaKnown RBP11.66□□□□□ -0.54
MSH2-206ENST00000543555 NDRG3Q9UGV2 375 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms